CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
plasma membrane 2
extracellular 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94771	Soybean	endoplasmic reticulum	64.86	38.1
KRH06758	Soybean	plasma membrane	64.86	37.7
AT3G12030.1	Thale cress	plasma membrane	58.56	33.16
Bra038695.1-P	Field mustard	plasma membrane	57.66	32.82
CDY47899	Canola	plasma membrane	57.66	32.82
AT5G06660.1	Thale cress	plasma membrane	56.76	32.14
VIT_08s0007g06790.t01	Wine grape	plasma membrane	54.95	31.61
PGSC0003DMT400029800	Potato	plasma membrane	53.15	30.41
Solyc10g079000.1.1	Tomato	nucleus	53.15	30.41
Zm00001d033818_P002	Maize	extracellular	43.24	24.12
TraesCS4D01G052900.1	Wheat	golgi	43.24	24.12
TraesCS4B01G052700.1	Wheat	endoplasmic reticulum, plastid, vacuole	43.24	24.12
Zm00001d013397_P001	Maize	plastid	43.24	23.88
EER90966	Sorghum	endoplasmic reticulum, plastid, vacuole	43.24	23.65
Os03t0721400-01	Rice	plasma membrane	43.24	22.97
KXG25953	Sorghum	plastid	28.83	21.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	13.51	12.4

Protein Annotations

MapMan:35.2	EMBL:ACUP02004132	EnsemblPlantsGene:GLYMA_07G000600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005262
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030176
GO:GO:0032469	GO:GO:0070588	UniProt:K7KYS2	EnsemblPlants:KRH46963	ProteinID:KRH46963	ProteinID:KRH46963.1
PANTHER:PTHR20917	InterPro:TMCO1	TMHMM:TMhelix	UniParc:UPI000294CBEA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:80494..86999

Molecular Weight (calculated)

12527.6 Da

IEP (calculated)

10.589

GRAVY (calculated)

-0.093

Length

111 amino acids

Sequence
(BLAST)

001: MGFYLSDQFL QNPPLTKKPP RNLRPCMKTD NNKINIKKSK TIKIDRVETS LKESSRDLSL FKFKSGGVVA LVLFVVFGLL NSLYEGKVVA KLPYKPFVIS
101: GPPEFKATFC I

Best Arabidopsis Sequence Match ( AT5G06660.1 )
(BLAST)

001: MATAIPLFAS FKYADSLTVV GISFCTALVC EAISWILIYR TSSYKSLKSS IDKASKKLET MKTDNPSSKL TNKKSKTKKI DRVESSLKES SRDLSLFKFK
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPITIVRKMS HRGLKGDDST DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGGLFPM PDPKTN

Arabidopsis Description

Calcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:Q9FG04]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.