CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 5
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038695.1-P	Field mustard	plasma membrane	100.0	100.0
AT3G12030.1	Thale cress	plasma membrane	94.36	93.88
AT5G06660.1	Thale cress	plasma membrane	92.31	91.84
VIT_08s0007g06790.t01	Wine grape	plasma membrane	80.51	81.35
KRH06758	Soybean	plasma membrane	78.46	80.1
KRG94771	Soybean	endoplasmic reticulum	77.44	79.89
Solyc10g079000.1.1	Tomato	nucleus	78.46	78.87
PGSC0003DMT400029800	Potato	plasma membrane	78.46	78.87
Zm00001d033818_P002	Maize	extracellular	65.64	64.32
TraesCS4D01G052900.1	Wheat	golgi	64.1	62.81
EER90966	Sorghum	endoplasmic reticulum, plastid, vacuole	65.13	62.56
TraesCS4B01G052700.1	Wheat	endoplasmic reticulum, plastid, vacuole	63.59	62.31
Zm00001d013397_P001	Maize	plastid	64.1	62.19
Os03t0721400-01	Rice	plasma membrane	63.08	58.85
KRH46963	Soybean	plastid	32.82	57.66
KXG25953	Sorghum	plastid	36.92	48.0
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	28.72	46.28

Protein Annotations

MapMan:35.2	GO:A0A078IEV1	UniProt:A0A078IEV1	EnsemblPlants:CDY47899	ProteinID:CDY47899	ProteinID:CDY47899.1
InterPro:EMC3/TMCO1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005262	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030176	GO:GO:0032469
GO:GO:0070588	EnsemblPlantsGene:GSBRNA2T00088412001	PFAM:PF01956	PIRSF:PIRSF023322	PANTHER:PTHR20917	SMART:SM01415
InterPro:TMCO1	TMHMM:TMhelix	UniParc:UPI0002545418	SEG:seg	:	:

Description

BnaAnng09310DCalcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:A0A078IEV1]

Coordinates

chrLK032744:+:35776..37131

Molecular Weight (calculated)

21422.6 Da

IEP (calculated)

10.410

GRAVY (calculated)

0.162

Length

195 amino acids

Sequence
(BLAST)

001: MATTIPLFAS FKYADSLTVV GISFCTALVC EAISWILIYR TTSYKSLKYS IDKAAKKLET MKTENPSSKL TVKKSKTKKM DRVETSLKES SRDLSLFKFK
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPIAIVKKMS HRGLKGDDAT DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGLFPMP DPKTN

Best Arabidopsis Sequence Match ( AT3G12030.1 )
(BLAST)

001: MATTIPLFAS FKYADSLTVV GISFCTALVC EAISWILIYR TSSYKSLKYS IDKATKKLET MKTENPSSKL SIKKSKTKKI DRVETSLKES SRDLSLFKFK
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPITIVKKMS HRGLKGDDPT DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGGLFPM PDPKTN

Arabidopsis Description

Calcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:A0A178VFR5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.