Factsheet for AT3G12030.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 5
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G06660.1	Thale cress	plasma membrane	95.41	95.41
Bra038695.1-P	Field mustard	plasma membrane	93.88	94.36
CDY47899	Canola	plasma membrane	93.88	94.36
KRH06758	Soybean	plasma membrane	79.08	81.15
KRG94771	Soybean	endoplasmic reticulum	77.55	80.42
VIT_08s0007g06790.t01	Wine grape	plasma membrane	78.06	79.27
Solyc10g079000.1.1	Tomato	nucleus	76.02	76.8
PGSC0003DMT400029800	Potato	plasma membrane	76.02	76.8
Zm00001d033818_P002	Maize	extracellular	64.8	63.82
TraesCS4D01G052900.1	Wheat	golgi	63.78	62.81
EER90966	Sorghum	endoplasmic reticulum, plastid, vacuole	64.8	62.56
TraesCS4B01G052700.1	Wheat	endoplasmic reticulum, plastid, vacuole	63.27	62.31
Zm00001d013397_P001	Maize	plastid	63.78	62.19
Os03t0721400-01	Rice	plasma membrane	62.76	58.85
KRH46963	Soybean	plastid	33.16	58.56
KXG25953	Sorghum	plastid	37.24	48.67
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	29.08	47.11

Protein Annotations

MapMan:35.2	EntrezGene:820377	UniProt:A0A178VFR5	ProteinID:AAG51041.1	ProteinID:AEE75139.1	EMBL:AK118289
ArrayExpress:AT3G12030	EnsemblPlantsGene:AT3G12030	RefSeq:AT3G12030	TAIR:AT3G12030	RefSeq:AT3G12030-TAIR-G	EnsemblPlants:AT3G12030.1
TAIR:AT3G12030.1	Unigene:At.64995	ProteinID:BAB03115.1	EMBL:BT005514	ncoils:Coil	InterPro:EMC3/TMCO1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005262	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030176	GO:GO:0032469
GO:GO:0070588	RefSeq:NP_566409.1	ProteinID:OAP04361.1	PFAM:PF01956	PIRSF:PIRSF023322	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR20917
UniProt:Q9LHL8	SMART:SM01415	InterPro:TMCO1	TMHMM:TMhelix	UniParc:UPI000000C68D	SEG:seg

Description

Calcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:A0A178VFR5]

Coordinates

chr3:-:3834361..3835107

Molecular Weight (calculated)

21533.6 Da

IEP (calculated)

10.410

GRAVY (calculated)

0.130

Length

196 amino acids

Sequence
(BLAST)

001: MATTIPLFAS FKYADSLTVV GISFCTALVC EAISWILIYR TSSYKSLKYS IDKATKKLET MKTENPSSKL SIKKSKTKKI DRVETSLKES SRDLSLFKFK
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPITIVKKMS HRGLKGDDPT DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGGLFPM PDPKTN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.