Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013397_P001 | Maize | plastid | 95.57 | 96.52 |
| TraesCS4B01G052700.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 86.21 | 87.94 |
| TraesCS4D01G052900.1 | Wheat | golgi | 86.21 | 87.94 |
| Os03t0721400-01 | Rice | plasma membrane | 89.16 | 86.6 |
| VIT_08s0007g06790.t01 | Wine grape | plasma membrane | 65.02 | 68.39 |
| KRG94771 | Soybean | endoplasmic reticulum | 62.56 | 67.2 |
| KRH06758 | Soybean | plasma membrane | 63.05 | 67.02 |
| Bra038695.1-P | Field mustard | plasma membrane | 62.56 | 65.13 |
| CDY47899 | Canola | plasma membrane | 62.56 | 65.13 |
| AT3G12030.1 | Thale cress | plasma membrane | 62.56 | 64.8 |
| PGSC0003DMT400029800 | Potato | plasma membrane | 61.58 | 64.43 |
| Solyc10g079000.1.1 | Tomato | nucleus | 61.58 | 64.43 |
| AT5G06660.1 | Thale cress | plasma membrane | 62.07 | 64.29 |
| KXG25953 | Sorghum | plastid | 47.29 | 64.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 28.57 | 47.93 |
| KRH46963 | Soybean | plastid | 23.65 | 43.24 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8063362 | UniProt:C5WMX6 | ncoils:Coil | EnsemblPlants:EER90966 | ProteinID:EER90966 |
| ProteinID:EER90966.1 | InterPro:EMC3/TMCO1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005262 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030176 |
| GO:GO:0032469 | GO:GO:0070588 | PFAM:PF01956 | PIRSF:PIRSF023322 | PANTHER:PTHR20917 | SMART:SM01415 |
| EnsemblPlantsGene:SORBI_3001G110300 | unigene:Sbi.19318 | InterPro:TMCO1 | TMHMM:TMhelix | UniParc:UPI0001A82480 | RefSeq:XP_002463968.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:8561928..8562798
Molecular Weight (calculated)
21316.9 Da
IEP (calculated)
10.595
GRAVY (calculated)
0.184
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MASALSSLRY GDSLSVVGIS AATAVLCEAI SWLLIYRTAT YNSLRASIER HSRKLDAMKS GSSSSSSSSG AGASSAQPAS SRAKKMDRVE TSLKDAAREL
101: SLAKLKSGAV VAAVLFVVFG LLNSLFEGRT VAKLPFAPIP LVQRMSHRGL PGNDPTDCSM VFLYFLCSMS IRTNLQKLLG FAPPRAAAAA GGGLFPMPDP
201: KVN
101: SLAKLKSGAV VAAVLFVVFG LLNSLFEGRT VAKLPFAPIP LVQRMSHRGL PGNDPTDCSM VFLYFLCSMS IRTNLQKLLG FAPPRAAAAA GGGLFPMPDP
201: KVN
001: MATAIPLFAS FKYADSLTVV GISFCTALVC EAISWILIYR TSSYKSLKSS IDKASKKLET MKTDNPSSKL TNKKSKTKKI DRVESSLKES SRDLSLFKFK
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPITIVRKMS HRGLKGDDST DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGGLFPM PDPKTN
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPITIVRKMS HRGLKGDDST DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGGLFPM PDPKTN
Arabidopsis Description
Calcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:Q9FG04]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.