Factsheet for Os03t0721400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plastid

plasma membrane: 18260611
nucleus: 19621931
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90966	Sorghum	endoplasmic reticulum, plastid, vacuole	86.6	89.16
Zm00001d033818_P002	Maize	extracellular	83.73	87.94
TraesCS4B01G052700.1	Wheat	endoplasmic reticulum, plastid, vacuole	83.73	87.94
TraesCS4D01G052900.1	Wheat	golgi	83.25	87.44
Zm00001d013397_P001	Maize	plastid	83.25	86.57
VIT_08s0007g06790.t01	Wine grape	plasma membrane	61.72	66.84
KRG94771	Soybean	endoplasmic reticulum	59.81	66.14
KRH06758	Soybean	plasma membrane	60.29	65.97
PGSC0003DMT400029800	Potato	plasma membrane	59.33	63.92
Solyc10g079000.1.1	Tomato	nucleus	59.33	63.92
Bra038695.1-P	Field mustard	plasma membrane	58.85	63.08
CDY47899	Canola	plasma membrane	58.85	63.08
AT3G12030.1	Thale cress	plasma membrane	58.85	62.76
AT5G06660.1	Thale cress	plasma membrane	58.37	62.24
KXG25953	Sorghum	plastid	43.54	60.67
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	26.32	45.45
KRH46963	Soybean	plastid	22.97	43.24

Protein Annotations

MapMan:35.2	EntrezGene:4333937	ProteinID:AAT77840.1	ProteinID:AAX95702.1	ProteinID:ABF98591.1	EMBL:AK059834
EMBL:AK102605	ProteinID:BAF13018.1	ProteinID:BAS86127.1	ProteinID:EAZ28405.1	InterPro:EMC3/TMCO1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005262	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0030176	GO:GO:0032469	GO:GO:0070588	EnsemblPlantsGene:Os03g0721400
EnsemblPlants:Os03t0721400-01	PFAM:PF01956	PIRSF:PIRSF023322	PANTHER:PTHR20917	UniProt:Q6ASU6	SMART:SM01415
InterPro:TMCO1	TMHMM:TMhelix	UniParc:UPI00003E2008	RefSeq:XP_015633352.1	SEG:seg	:

Description

Protein of unknown function DUF841, eukaryotic family protein. (Os03t0721400-01);Protein of unknown function DUF841, eukaryotic family protein. (Os03t0721400-02)

Coordinates

chr3:-:29275573..29278607

Molecular Weight (calculated)

21728.3 Da

IEP (calculated)

10.595

GRAVY (calculated)

0.184

Length

209 amino acids

Sequence
(BLAST)

001: MASALSSLRY GDSLSVVAIS GATAVLCEAI SWLLIYRTAT YNSLRATIER HSRKLDAMKA GASNSSSSSS AGAGASGSSQ PAGSSSSRAK KMDRVETSLK
101: DAARELSLSK LKSGAVVAAV LFVVFGLLNS LFEGRAVAKL PFAPVPLVQR MSHRGVPGND PTDCSMVFLY FLCSISIRTN LQKLLGFAPP RAAAAAGGGL
201: FPMPDPKVN

Best Arabidopsis Sequence Match ( AT5G06660.1 )
(BLAST)

001: MATAIPLFAS FKYADSLTVV GISFCTALVC EAISWILIYR TSSYKSLKSS IDKASKKLET MKTDNPSSKL TNKKSKTKKI DRVESSLKES SRDLSLFKFK
101: SGAVVALVLF VVFGLLNSLF EGKVVAKLPF HPITIVRKMS HRGLKGDDST DCSMAFLYLL CSISIRTNLQ KFLGFSPPRG AAGAGGLFPM PDPKTN

Arabidopsis Description

Calcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:Q9FG04]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.