Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- mitochondrion 3
- cytosol 2
- golgi 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89385 | |
| KRG92744 | |
| KRG94771 | |
| KRG96400 | |
| KRG96473 | |
| KRG96941 | |
| KRG97436 | |
| KRH03569 | |
| KRH04214 | |
| KRH04217 | |
| KRH05964 | |
| KRH06758 | |
| KRH08094 | |
| KRH08587 | |
| KRH08728 | |
| KRH09419 | |
| KRH09430 | |
| KRH10345 | |
| KRH10455 | |
| KRH12095 | |
| KRH13277 | |
| KRH16362 | |
| KRH17444 | |
| KRH20240 | |
| KRH22402 | |
| KRH24981 | |
| KRH25552 | |
| KRH25819 | |
| KRH25821 | |
| KRH26935 | |
| KRH28784 | |
| KRH30347 | |
| KRH31467 | |
| KRH31847 | |
| KRH31849 | |
| KRH32592 | |
| KRH34063 | |
| KRH37857 | |
| KRH37858 | |
| KRH42661 | |
| KRH42945 | |
| KRH43991 | |
| KRH46963 | |
| KRH53395 | |
| KRH53793 | |
| KRH55687 | |
| KRH55704 | |
| KRH55988 | |
| KRH56320 | |
| KRH56423 | |
| KRH58763 | |
| KRH59070 | |
| KRH62493 | |
| KRH62765 | |
| KRH64028 | |
| KRH64151 | |
| KRH64544 | |
| KRH68137 | |
| KRH68219 | |
| KRH68706 | |
| KRH69268 | |
| KRH69269 | |
| KRH69797 | |
| KRH75732 | |
| KRH76216 | |
| KRH76671 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02195.1 | KRG96400 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRG96473 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH31847 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH31849 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH68137 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH68219 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH69268 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH69269 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH76216 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH32592 | AT1G07660.1 | 24556609 |
| AT4G02195.1 | KRH10455 | AT1G25260.1 | 24556609 |
| AT4G02195.1 | KRH43991 | AT1G25260.1 | 24556609 |
| AT4G02195.1 | KRG97436 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH08728 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH31467 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH42661 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH58763 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRG89385 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH08587 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH09419 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH09430 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH53793 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH64151 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH53395 | AT1G77140.1 | 10888666 |
| AT4G02195.1 | KRH64544 | AT1G77140.1 | 10888666 |
| AT4G02195.1 | KRH53395 | AT1G77140.1 | 24556609 |
| AT4G02195.1 | KRH64544 | AT1G77140.1 | 24556609 |
| AT4G02195.1 | KRH08094 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH28784 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH69797 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH76671 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH12095 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH13277 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH16362 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH25819 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH25821 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH55687 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH55704 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH56320 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH56423 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH62493 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH62765 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRG92744 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRG96941 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH04214 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH04217 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH34063 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH64028 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH68706 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRG94771 | AT3G12030.1 | 24556609 |
| AT4G02195.1 | KRH06758 | AT3G12030.1 | 24556609 |
| AT4G02195.1 | KRH46963 | AT3G12030.1 | 24556609 |
| AT4G02195.1 | KRH30347 | AT3G45930.1 | 24556609 |
| AT4G02195.1 | KRH03569 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH20240 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH37857 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH37858 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH75732 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH10345 | AT3G53730.1 | 24556609 |
| AT4G02195.1 | KRH24981 | AT3G53730.1 | 24556609 |
| AT4G02195.1 | KRH42945 | AT4G18060.1 | 24556609 |
| AT4G02195.1 | KRH59070 | AT4G18060.1 | 24556609 |
| AT4G02195.1 | KRH05964 | AT4G24190.1 | 24556609 |
| AT4G02195.1 | KRH17444 | AT4G24190.1 | 24556609 |
| AT4G02195.1 | KRH22402 | AT4G28250.1 | 24556609 |
| AT4G02195.1 | KRH25552 | AT4G28250.1 | 24556609 |
| AT4G02195.1 | KRH26935 | AT4G28250.1 | 24556609 |
| AT4G02195.1 | KRH55988 | AT4G28250.1 | 24556609 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68233 | Soybean | plastid | 93.83 | 95.0 |
| VIT_07s0005g01000.t01 | Wine grape | mitochondrion | 72.53 | 73.9 |
| KRG92945 | Soybean | mitochondrion | 72.22 | 71.78 |
| KRH33850 | Soybean | endoplasmic reticulum | 71.91 | 71.47 |
| TraesCS7D01G044300.1 | Wheat | cytosol | 51.85 | 70.59 |
| Zm00001d039404_P001 | Maize | plasma membrane | 69.75 | 69.97 |
| Os06t0116300-01 | Rice | plasma membrane | 70.99 | 69.7 |
| OQU86127 | Sorghum | mitochondrion | 70.06 | 69.63 |
| Zm00001d013996_P003 | Maize | mitochondrion | 68.52 | 69.38 |
| GSMUA_Achr11P... | Banana | mitochondrion | 68.83 | 68.62 |
| TraesCS7A01G049200.1 | Wheat | mitochondrion | 69.14 | 68.29 |
| GSMUA_Achr10P... | Banana | mitochondrion | 69.14 | 67.88 |
| CDY22037 | Canola | mitochondrion | 67.28 | 67.7 |
| Bra036287.1-P | Field mustard | cytosol, mitochondrion | 59.57 | 67.01 |
| AT4G02195.1 | Thale cress | cytosol, mitochondrion, plastid | 66.67 | 66.87 |
| CDY52786 | Canola | mitochondrion | 65.74 | 66.15 |
| Solyc09g075530.2.1 | Tomato | cytosol, mitochondrion | 65.12 | 66.14 |
| GSMUA_Achr4P18460_001 | Banana | mitochondrion | 68.21 | 65.97 |
| CDX97432 | Canola | extracellular, vacuole | 5.25 | 65.38 |
| EER87742 | Sorghum | mitochondrion | 45.06 | 61.34 |
| HORVU7Hr1G008670.5 | Barley | mitochondrion | 68.21 | 61.05 |
| TraesCS4A01G435000.1 | Wheat | mitochondrion | 61.11 | 60.37 |
| PGSC0003DMT400081334 | Potato | mitochondrion | 58.95 | 59.69 |
| Zm00001d045530_P001 | Maize | cytosol | 16.36 | 58.89 |
| HORVU7Hr1G008640.2 | Barley | mitochondrion | 42.59 | 53.08 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:100803629 | MapMan:22.7.1.4 | EMBL:ACUP02012155 | EMBL:BT094965 |
| UniProt:C6TBP9 | EnsemblPlantsGene:GLYMA_19G214000 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | InterPro:IPR000727 |
| EnsemblPlants:KRG96492 | ProteinID:KRG96492 | ProteinID:KRG96492.1 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF83 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 |
| InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0001B15C8F | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:+:46735496..46739440
Molecular Weight (calculated)
36309.4 Da
IEP (calculated)
7.575
GRAVY (calculated)
-0.429
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRNRTIEF RKHRDAVKSV RAPLSSSASA STGPVIEMVT TSLLPPNRSS SYALLSTQEP APSTSRDAFT VGLPPSWVDD SEEIATNIQR ARVKISELTK
101: AHAKALMPSF GDGKEDQRHI ETLTQEITSL LRKSEVRLRR LSAAAGSSED SNVRKNVQRS LATDLQNLSM DLRRKQSAYL KRLQQQQEGY DGIDLEMSFT
201: GSKFGSQNDE FSDVGFSEEQ MTKLKRSEQF SEEREREIEQ VVKSVHELAQ IMKDLSVLVI DQGTIVDRID YNIQSVSTSV EEGLKQLQKA ERTQKKGGMV
301: MCATTLVIMC FVMLVLLILK EILF
101: AHAKALMPSF GDGKEDQRHI ETLTQEITSL LRKSEVRLRR LSAAAGSSED SNVRKNVQRS LATDLQNLSM DLRRKQSAYL KRLQQQQEGY DGIDLEMSFT
201: GSKFGSQNDE FSDVGFSEEQ MTKLKRSEQF SEEREREIEQ VVKSVHELAQ IMKDLSVLVI DQGTIVDRID YNIQSVSTSV EEGLKQLQKA ERTQKKGGMV
301: MCATTLVIMC FVMLVLLILK EILF
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSSRGTIT VGLPPDWVDV SEEISVYIQR
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
Arabidopsis Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.