Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- mitochondrion 2
- cytosol 3
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P21580_001 | Banana | cytosol | 89.25 | 83.0 |
| GSMUA_Achr3P21350_001 | Banana | cytosol | 84.95 | 82.29 |
| GSMUA_Achr3P01630_001 | Banana | cytosol | 84.95 | 79.0 |
| GSMUA_Achr6P10560_001 | Banana | cytosol | 81.72 | 78.35 |
| GSMUA_Achr2P22080_001 | Banana | cytosol | 89.25 | 75.45 |
| CDY61186 | Canola | cytosol | 76.34 | 59.17 |
| VIT_03s0063g00130.t01 | Wine grape | cytosol | 88.17 | 56.94 |
| PGSC0003DMT400077257 | Potato | cytosol | 89.25 | 56.46 |
| Solyc04g026100.1.1 | Tomato | nucleus | 89.25 | 56.46 |
| VIT_05s0020g02990.t01 | Wine grape | cytosol | 87.1 | 56.25 |
| PGSC0003DMT400010554 | Potato | cytosol | 88.17 | 55.78 |
| Solyc05g005690.1.1 | Tomato | nucleus | 88.17 | 55.78 |
| Solyc01g068530.2.1 | Tomato | nucleus | 89.25 | 55.33 |
| KRH41748 | Soybean | nucleus | 88.17 | 52.9 |
| AT5G18380.1 | Thale cress | cytosol | 82.8 | 52.74 |
| AT2G09990.1 | Thale cress | cytosol | 82.8 | 52.74 |
| KRH60450 | Soybean | nucleus | 87.1 | 51.59 |
| CDX92061 | Canola | cytosol | 80.65 | 51.37 |
| CDY25423 | Canola | cytosol | 80.65 | 51.37 |
| CDY29988 | Canola | cytosol | 80.65 | 51.37 |
| KRH70668 | Soybean | nucleus | 86.02 | 51.28 |
| KRH50326 | Soybean | cytosol | 86.02 | 51.28 |
| CDY21134 | Canola | cytosol, mitochondrion | 79.57 | 50.68 |
| Bra001098.1-P | Field mustard | cytosol, mitochondrion | 79.57 | 50.68 |
| Bra006454.1-P | Field mustard | cytosol | 79.57 | 50.68 |
| CDY70652 | Canola | extracellular | 79.57 | 50.68 |
| Bra040207.1-P | Field mustard | mitochondrion | 79.57 | 50.68 |
| CDX70812 | Canola | cytosol | 79.57 | 50.68 |
| CDY51232 | Canola | cytosol | 79.57 | 50.68 |
| Bra040145.1-P | Field mustard | cytosol, mitochondrion | 78.49 | 50.0 |
| AT3G04230.1 | Thale cress | cytosol, mitochondrion, plastid | 78.49 | 50.0 |
| CDY49352 | Canola | cytosol, mitochondrion | 78.49 | 50.0 |
| CDY42912 | Canola | cytosol, mitochondrion | 78.49 | 50.0 |
| Os11t0127900-01 | Rice | plastid | 78.49 | 48.99 |
| Os12t0124200-01 | Rice | plastid | 78.49 | 48.99 |
| TraesCS4A01G323600.1 | Wheat | mitochondrion | 78.49 | 48.67 |
| EES09177 | Sorghum | mitochondrion | 76.34 | 47.97 |
| Zm00001d005023_P001 | Maize | plasma membrane, plastid | 76.34 | 47.97 |
| Zm00001d044664_P001 | Maize | plastid | 76.34 | 47.65 |
| EES15592 | Sorghum | mitochondrion | 76.34 | 47.65 |
| HORVU4Hr1G023530.1 | Barley | mitochondrion, plastid | 75.27 | 46.98 |
| TraesCS4A01G190200.1 | Wheat | mitochondrion, plastid | 75.27 | 46.98 |
| TraesCS4A01G190500.1 | Wheat | plastid | 75.27 | 46.98 |
| TraesCS4B01G129400.1 | Wheat | mitochondrion, plastid | 75.27 | 46.98 |
| TraesCS4B01G129600.1 | Wheat | mitochondrion, plastid | 75.27 | 46.98 |
| TraesCS4D01G122900.1 | Wheat | mitochondrion, plastid | 75.27 | 46.98 |
| TraesCS4D01G123000.1 | Wheat | golgi, nucleus, unclear | 75.27 | 46.98 |
| TraesCS5A01G142900.1 | Wheat | mitochondrion, plastid | 75.27 | 46.98 |
| TraesCS5B01G141700.1 | Wheat | golgi, unclear | 75.27 | 46.98 |
| TraesCS5D01G149100.1 | Wheat | mitochondrion, plastid | 75.27 | 46.98 |
| Zm00001d023293_P001 | Maize | plasma membrane | 75.27 | 46.98 |
| CDY24915 | Canola | cytosol | 72.04 | 45.58 |
| TraesCS5B01G554700.1 | Wheat | cytosol | 63.44 | 44.36 |
| HORVU5Hr1G045620.1 | Barley | plastid | 75.27 | 39.33 |
| HORVU4Hr1G023570.2 | Barley | mitochondrion | 75.27 | 35.35 |
| CDY25446 | Canola | plastid | 36.56 | 34.69 |
| VIT_18s0001g14620.t01 | Wine grape | cytosol | 46.24 | 27.39 |
| Bra025108.1-P | Field mustard | cytosol | 36.56 | 27.2 |
| CDY53247 | Canola | mitochondrion | 21.51 | 13.24 |
Protein Annotations
| Gene3D:3.30.230.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr7G11640_001 | EnsemblPlants:GSMUA_Achr7P11640_001 |
| EnsemblPlants:GSMUA_Achr7T11640_001 | InterPro:IPR014721 | UniProt:M0TGQ2 | PFAM:PF00380 | PANTHER:PTHR21569 | PANTHER:PTHR21569:SF7 |
| InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S9 | SUPFAM:SSF54211 | UniParc:UPI000295E350 | SEG:seg |
Description
40S ribosomal protein S16 [Source:GMGC_GENE;Acc:GSMUA_Achr7G11640_001]
Coordinates
chr7:+:9273313..9273694
Molecular Weight (calculated)
10520.2 Da
IEP (calculated)
11.456
GRAVY (calculated)
-0.423
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAAVVESVQ CFGRKKTAVA VGHCKRGRGL IKVNGVPIEL VKPEILRLKQ SKKEIKDILV RYDRTLLVAD PRRCEPKRFG GRGARARFQK SYR
001: MATQPATESV QCFGRKKTAV AVTHCKRGSG LIKLNGCPIE LFQPEILRFK IFEPVLLLGK HRFAGVNMRI RVNGGGHTSQ VYAIRQSIAK ALVAYYQKYV
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR
Arabidopsis Description
RPS16C40S ribosomal protein S16-3 [Source:UniProtKB/Swiss-Prot;Acc:Q42340]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.