Factsheet for AT2G09990.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G18380.1	Thale cress	cytosol	99.32	99.32
CDY29988	Canola	cytosol	91.78	91.78
CDY21134	Canola	cytosol, mitochondrion	91.78	91.78
CDX92061	Canola	cytosol	91.78	91.78
CDY61186	Canola	cytosol	75.34	91.67
CDY25423	Canola	cytosol	91.1	91.1
CDY70652	Canola	extracellular	91.1	91.1
CDY42912	Canola	cytosol, mitochondrion	91.1	91.1
Bra040145.1-P	Field mustard	cytosol, mitochondrion	91.1	91.1
Bra001098.1-P	Field mustard	cytosol, mitochondrion	90.41	90.41
CDX70812	Canola	cytosol	89.73	89.73
CDY49352	Canola	cytosol, mitochondrion	89.73	89.73
CDY51232	Canola	cytosol	89.73	89.73
Bra006454.1-P	Field mustard	cytosol	89.73	89.73
Bra040207.1-P	Field mustard	mitochondrion	88.36	88.36
AT3G04230.1	Thale cress	cytosol, mitochondrion, plastid	88.36	88.36
GSMUA_Achr6P10560_001	Banana	cytosol	58.22	87.63
Solyc04g026100.1.1	Tomato	nucleus	86.3	85.71
PGSC0003DMT400077257	Potato	cytosol	86.3	85.71
VIT_03s0063g00130.t01	Wine grape	cytosol	84.25	85.42
VIT_05s0020g02990.t01	Wine grape	cytosol	84.25	85.42
GSMUA_Achr3P21350_001	Banana	cytosol	55.48	84.38
Solyc05g005690.1.1	Tomato	nucleus	84.93	84.35
PGSC0003DMT400010554	Potato	cytosol	84.93	84.35
CDY24915	Canola	cytosol	84.25	83.67
GSMUA_Achr7P11640_001	Banana	cytosol	52.74	82.8
Solyc01g068530.2.1	Tomato	nucleus	84.93	82.67
GSMUA_Achr3P01630_001	Banana	cytosol	56.16	82.0
KRH60450	Soybean	nucleus	86.99	80.89
KRH50326	Soybean	cytosol	86.3	80.77
KRH70668	Soybean	nucleus	86.3	80.77
KRH41748	Soybean	nucleus	85.62	80.65
GSMUA_Achr1P21580_001	Banana	cytosol	52.05	76.0
Os11t0127900-01	Rice	plastid	74.66	73.15
Os12t0124200-01	Rice	plastid	74.66	73.15
GSMUA_Achr2P22080_001	Banana	cytosol	54.11	71.82
TraesCS4A01G323600.1	Wheat	mitochondrion	72.6	70.67
TraesCS5D01G149100.1	Wheat	mitochondrion, plastid	71.92	70.47
HORVU4Hr1G023530.1	Barley	mitochondrion, plastid	71.92	70.47
EES15592	Sorghum	mitochondrion	71.92	70.47
TraesCS4A01G190200.1	Wheat	mitochondrion, plastid	71.92	70.47
TraesCS4A01G190500.1	Wheat	plastid	71.92	70.47
TraesCS4B01G129400.1	Wheat	mitochondrion, plastid	71.92	70.47
TraesCS4B01G129600.1	Wheat	mitochondrion, plastid	71.92	70.47
TraesCS4D01G122900.1	Wheat	mitochondrion, plastid	71.92	70.47
TraesCS4D01G123000.1	Wheat	golgi, nucleus, unclear	71.92	70.47
TraesCS5A01G142900.1	Wheat	mitochondrion, plastid	71.92	70.47
TraesCS5B01G141700.1	Wheat	golgi, unclear	71.92	70.47
EES09177	Sorghum	mitochondrion	71.23	70.27
Zm00001d005023_P001	Maize	plasma membrane, plastid	71.23	70.27
TraesCS5B01G554700.1	Wheat	cytosol	63.7	69.92
Zm00001d044664_P001	Maize	plastid	71.23	69.8
Zm00001d023293_P001	Maize	plasma membrane	69.18	67.79
HORVU5Hr1G045620.1	Barley	plastid	71.92	58.99
HORVU4Hr1G023570.2	Barley	mitochondrion	71.92	53.03
VIT_18s0001g14620.t01	Wine grape	cytosol	56.85	52.87
CDY53247	Canola	mitochondrion	36.3	35.1

Protein Annotations

MapMan:17.1.3.1.18	Gene3D:3.30.230.10	EntrezGene:815456	UniProt:A0A178W2C4	ProteinID:AAD22696.1	ProteinID:AEC06138.1
EMBL:AF370576	ArrayExpress:AT2G09990	EnsemblPlantsGene:AT2G09990	RefSeq:AT2G09990	TAIR:AT2G09990	RefSeq:AT2G09990-TAIR-G
EnsemblPlants:AT2G09990.1	TAIR:AT2G09990.1	EMBL:AY086902	GO:GO:0000462	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006139
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538	GO:GO:0022626	GO:GO:0022627
GO:GO:0030312	GO:GO:0030529	GO:GO:0042788	InterPro:IPR014721	RefSeq:NP_178826.1	ProteinID:OAP11493.1
PFAM:PF00380	PO:PO:0000293	PO:PO:0005052	PO:PO:0007131	PO:PO:0009025	ScanProsite:PS00360
PANTHER:PTHR21569	PANTHER:PTHR21569:SF7	UniProt:Q9SK22	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9
InterPro:Ribosomal_S9_CS	SUPFAM:SSF54211	UniParc:UPI00000A9BF0	:	:	:

Description

RPS16A40S ribosomal protein S16-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK22]

Coordinates

chr2:+:3781328..3782335

Molecular Weight (calculated)

16632.5 Da

IEP (calculated)

10.791

GRAVY (calculated)

-0.430

Length

146 amino acids

Sequence
(BLAST)

001: MATQPATESV QCFGRKKTAV AVTHCKRGSG LIKLNGCPIE LFQPEILRFK IFEPILLLGK HRFAGVNMRI RVNGGGHTSQ VYAIRQSIAK ALVAYYQKYV
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.