Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G149100.1 | Wheat | mitochondrion, plastid | 83.71 | 100.0 |
| TraesCS5B01G141700.1 | Wheat | golgi, unclear | 83.71 | 100.0 |
| TraesCS5A01G142900.1 | Wheat | mitochondrion, plastid | 83.71 | 100.0 |
| EES15592 | Sorghum | mitochondrion | 80.34 | 95.97 |
| HORVU4Hr1G023530.1 | Barley | mitochondrion, plastid | 79.78 | 95.3 |
| Zm00001d044664_P001 | Maize | plastid | 79.78 | 95.3 |
| EES09177 | Sorghum | mitochondrion | 79.21 | 95.27 |
| Zm00001d005023_P001 | Maize | plasma membrane, plastid | 78.09 | 93.92 |
| Zm00001d023293_P001 | Maize | plasma membrane | 76.4 | 91.28 |
| GSMUA_Achr6P10560_001 | Banana | cytosol | 42.7 | 78.35 |
| GSMUA_Achr3P21350_001 | Banana | cytosol | 42.13 | 78.12 |
| VIT_05s0020g02990.t01 | Wine grape | cytosol | 62.36 | 77.08 |
| GSMUA_Achr3P01630_001 | Banana | cytosol | 43.26 | 77.0 |
| VIT_03s0063g00130.t01 | Wine grape | cytosol | 61.8 | 76.39 |
| GSMUA_Achr7P11640_001 | Banana | cytosol | 39.33 | 75.27 |
| PGSC0003DMT400010554 | Potato | cytosol | 61.8 | 74.83 |
| Solyc05g005690.1.1 | Tomato | nucleus | 61.8 | 74.83 |
| KRH41748 | Soybean | nucleus | 64.61 | 74.19 |
| GSMUA_Achr1P21580_001 | Banana | cytosol | 41.57 | 74.0 |
| HORVU4Hr1G023570.2 | Barley | mitochondrion | 82.02 | 73.74 |
| PGSC0003DMT400077257 | Potato | cytosol | 60.67 | 73.47 |
| Solyc04g026100.1.1 | Tomato | nucleus | 60.67 | 73.47 |
| CDY21134 | Canola | cytosol, mitochondrion | 60.11 | 73.29 |
| Solyc01g068530.2.1 | Tomato | nucleus | 61.24 | 72.67 |
| CDY42912 | Canola | cytosol, mitochondrion | 59.55 | 72.6 |
| CDY70652 | Canola | extracellular | 59.55 | 72.6 |
| Bra040145.1-P | Field mustard | cytosol, mitochondrion | 59.55 | 72.6 |
| Bra001098.1-P | Field mustard | cytosol, mitochondrion | 59.55 | 72.6 |
| AT2G09990.1 | Thale cress | cytosol | 58.99 | 71.92 |
| Bra006454.1-P | Field mustard | cytosol | 58.99 | 71.92 |
| CDY51232 | Canola | cytosol | 58.99 | 71.92 |
| CDY49352 | Canola | cytosol, mitochondrion | 58.99 | 71.92 |
| CDY29988 | Canola | cytosol | 58.99 | 71.92 |
| CDX70812 | Canola | cytosol | 58.99 | 71.92 |
| KRH60450 | Soybean | nucleus | 62.92 | 71.34 |
| CDY25423 | Canola | cytosol | 58.43 | 71.23 |
| CDX92061 | Canola | cytosol | 58.43 | 71.23 |
| AT5G18380.1 | Thale cress | cytosol | 58.43 | 71.23 |
| Bra040207.1-P | Field mustard | mitochondrion | 58.43 | 71.23 |
| KRH50326 | Soybean | cytosol | 62.36 | 71.15 |
| KRH70668 | Soybean | nucleus | 62.36 | 71.15 |
| CDY61186 | Canola | cytosol | 47.75 | 70.83 |
| AT3G04230.1 | Thale cress | cytosol, mitochondrion, plastid | 57.3 | 69.86 |
| GSMUA_Achr2P22080_001 | Banana | cytosol | 42.7 | 69.09 |
| CDY24915 | Canola | cytosol | 54.49 | 65.99 |
| CDY25446 | Canola | plastid | 30.34 | 55.1 |
| Bra025108.1-P | Field mustard | cytosol | 36.52 | 52.0 |
| VIT_18s0001g14620.t01 | Wine grape | cytosol | 42.7 | 48.41 |
| CDY53247 | Canola | mitochondrion | 26.4 | 31.13 |
Protein Annotations
| MapMan:17.1.3.1.18 | Gene3D:3.30.230.10 | UniProt:A0A287R153 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| EnsemblPlantsGene:HORVU5Hr1G045620 | EnsemblPlants:HORVU5Hr1G045620.1 | InterPro:IPR014721 | PFAM:PF00380 | ScanProsite:PS00360 | PANTHER:PTHR21569 |
| PANTHER:PTHR21569:SF7 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S9 | InterPro:Ribosomal_S9_CS | SUPFAM:SSF54211 |
| UniParc:UPI000B47C30C | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:352755344..352757223
Molecular Weight (calculated)
19417.0 Da
IEP (calculated)
11.189
GRAVY (calculated)
-0.266
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: LIPPPPPLPP DPAAAAAAAA ALPPGTTANM AAVLTRPTPG TVQCFGRKKT AVAVAYTKPG RGLIKVNGAP IELIRPEMLR LKAFEPIMLA GRSRFKDIDM
101: RIRVRGGGKT SQIYAIRQAV AKALVAYYQK YVDEAAKKEV KDIFARYDRT LLVADPRRCE PKKFGGRGAR ARFQKSYR
101: RIRVRGGGKT SQIYAIRQAV AKALVAYYQK YVDEAAKKEV KDIFARYDRT LLVADPRRCE PKKFGGRGAR ARFQKSYR
001: MATQPATESV QCFGRKKTAV AVTHCKRGSG LIKLNGCPIE LFQPEILRFK IFEPILLLGK HRFAGVNMRI RVNGGGHTSQ VYAIRQSIAK ALVAYYQKYV
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR
Arabidopsis Description
RPS16A40S ribosomal protein S16-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.