Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g026100.1.1 | Tomato | nucleus | 100.0 | 100.0 |
| PGSC0003DMT400010554 | Potato | cytosol | 94.56 | 94.56 |
| VIT_05s0020g02990.t01 | Wine grape | cytosol | 91.16 | 93.06 |
| VIT_03s0063g00130.t01 | Wine grape | cytosol | 91.16 | 93.06 |
| GSMUA_Achr7P11640_001 | Banana | cytosol | 56.46 | 89.25 |
| GSMUA_Achr3P21350_001 | Banana | cytosol | 57.82 | 88.54 |
| GSMUA_Achr6P10560_001 | Banana | cytosol | 57.82 | 87.63 |
| AT2G09990.1 | Thale cress | cytosol | 85.71 | 86.3 |
| GSMUA_Achr3P01630_001 | Banana | cytosol | 58.5 | 86.0 |
| AT5G18380.1 | Thale cress | cytosol | 85.03 | 85.62 |
| CDY49352 | Canola | cytosol, mitochondrion | 85.03 | 85.62 |
| CDY29988 | Canola | cytosol | 85.03 | 85.62 |
| KRH41748 | Soybean | nucleus | 89.8 | 85.16 |
| CDY21134 | Canola | cytosol, mitochondrion | 84.35 | 84.93 |
| CDX92061 | Canola | cytosol | 84.35 | 84.93 |
| CDY51232 | Canola | cytosol | 84.35 | 84.93 |
| CDX70812 | Canola | cytosol | 84.35 | 84.93 |
| Bra006454.1-P | Field mustard | cytosol | 84.35 | 84.93 |
| Bra040207.1-P | Field mustard | mitochondrion | 84.35 | 84.93 |
| KRH60450 | Soybean | nucleus | 90.48 | 84.71 |
| CDY42912 | Canola | cytosol, mitochondrion | 83.67 | 84.25 |
| Bra001098.1-P | Field mustard | cytosol, mitochondrion | 83.67 | 84.25 |
| CDY70652 | Canola | extracellular | 83.67 | 84.25 |
| CDY25423 | Canola | cytosol | 83.67 | 84.25 |
| Bra040145.1-P | Field mustard | cytosol, mitochondrion | 83.67 | 84.25 |
| KRH70668 | Soybean | nucleus | 88.44 | 83.33 |
| KRH50326 | Soybean | cytosol | 88.44 | 83.33 |
| CDY61186 | Canola | cytosol | 68.03 | 83.33 |
| GSMUA_Achr1P21580_001 | Banana | cytosol | 56.46 | 83.0 |
| AT3G04230.1 | Thale cress | cytosol, mitochondrion, plastid | 79.59 | 80.14 |
| CDY24915 | Canola | cytosol | 77.55 | 77.55 |
| GSMUA_Achr2P22080_001 | Banana | cytosol | 56.46 | 75.45 |
| Os11t0127900-01 | Rice | plastid | 76.19 | 75.17 |
| Os12t0124200-01 | Rice | plastid | 76.19 | 75.17 |
| Zm00001d005023_P001 | Maize | plasma membrane, plastid | 74.15 | 73.65 |
| EES09177 | Sorghum | mitochondrion | 74.15 | 73.65 |
| Zm00001d044664_P001 | Maize | plastid | 74.15 | 73.15 |
| EES15592 | Sorghum | mitochondrion | 74.15 | 73.15 |
| TraesCS4A01G323600.1 | Wheat | mitochondrion | 74.15 | 72.67 |
| TraesCS4B01G129400.1 | Wheat | mitochondrion, plastid | 73.47 | 72.48 |
| TraesCS5D01G149100.1 | Wheat | mitochondrion, plastid | 73.47 | 72.48 |
| TraesCS5B01G141700.1 | Wheat | golgi, unclear | 73.47 | 72.48 |
| TraesCS5A01G142900.1 | Wheat | mitochondrion, plastid | 73.47 | 72.48 |
| TraesCS4D01G123000.1 | Wheat | golgi, nucleus, unclear | 73.47 | 72.48 |
| TraesCS4D01G122900.1 | Wheat | mitochondrion, plastid | 73.47 | 72.48 |
| TraesCS4B01G129600.1 | Wheat | mitochondrion, plastid | 73.47 | 72.48 |
| TraesCS4A01G190500.1 | Wheat | plastid | 73.47 | 72.48 |
| TraesCS4A01G190200.1 | Wheat | mitochondrion, plastid | 73.47 | 72.48 |
| HORVU4Hr1G023530.1 | Barley | mitochondrion, plastid | 73.47 | 72.48 |
| Zm00001d023293_P001 | Maize | plasma membrane | 72.79 | 71.81 |
| TraesCS5B01G554700.1 | Wheat | cytosol | 64.63 | 71.43 |
| CDY25446 | Canola | plastid | 42.18 | 63.27 |
| Bra025108.1-P | Field mustard | cytosol | 51.7 | 60.8 |
| HORVU5Hr1G045620.1 | Barley | plastid | 73.47 | 60.67 |
| VIT_18s0001g14620.t01 | Wine grape | cytosol | 61.9 | 57.96 |
| HORVU4Hr1G023570.2 | Barley | mitochondrion | 73.47 | 54.55 |
| CDY53247 | Canola | mitochondrion | 38.78 | 37.75 |
Protein Annotations
| EntrezGene:102601557 | MapMan:17.1.3.1.18 | Gene3D:3.30.230.10 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| InterPro:IPR014721 | UniProt:M1CY42 | PFAM:PF00380 | EnsemblPlantsGene:PGSC0003DMG400030052 | PGSC:PGSC0003DMG400030052 | EnsemblPlants:PGSC0003DMT400077257 |
| ScanProsite:PS00360 | PANTHER:PTHR21569 | PANTHER:PTHR21569:SF7 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S9 |
| InterPro:Ribosomal_S9_CS | SUPFAM:SSF54211 | UniParc:UPI0002765E2A | RefSeq:XP_006341850.1 | : | : |
Description
Ribosomal protein S9 [Source:PGSC_GENE;Acc:PGSC0003DMG400030052]
Coordinates
chr4:-:20838024..20838633
Molecular Weight (calculated)
16652.5 Da
IEP (calculated)
10.832
GRAVY (calculated)
-0.393
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAATAES VQCFGRKKTA VAVTHCKRGK GLIKINGVPI ELVQPEILRY KAYEPILLLG RHRFAGVDMR IRVKGGGHTS QIYAIRQSIA KALVAFYQKY
101: VDEQSKKEIK DILVRYDRTL LVADPRRCEP KKFGGRGARS RFQKSYR
101: VDEQSKKEIK DILVRYDRTL LVADPRRCEP KKFGGRGARS RFQKSYR
001: MATQPATESV QCFGRKKTAV AVTHCKRGSG LIKLNGCPIE LFQPEILRFK IFEPILLLGK HRFAGVNMRI RVNGGGHTSQ VYAIRQSIAK ALVAYYQKYV
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR
Arabidopsis Description
RPS16A40S ribosomal protein S16-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.