CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25423	Canola	cytosol	99.17	81.51
CDX92061	Canola	cytosol	96.67	79.45
CDY29988	Canola	cytosol	95.83	78.77
CDY70652	Canola	extracellular	95.83	78.77
CDY21134	Canola	cytosol, mitochondrion	95.0	78.08
CDY42912	Canola	cytosol, mitochondrion	95.0	78.08
CDX70812	Canola	cytosol	93.33	76.71
CDY49352	Canola	cytosol, mitochondrion	93.33	76.71
CDY51232	Canola	cytosol	93.33	76.71
GSMUA_Achr7P11640_001	Banana	cytosol	59.17	76.34
AT5G18380.1	Thale cress	cytosol	92.5	76.03
AT2G09990.1	Thale cress	cytosol	91.67	75.34
GSMUA_Achr1P21580_001	Banana	cytosol	62.5	75.0
CDY24915	Canola	cytosol	89.17	72.79
GSMUA_Achr6P10560_001	Banana	cytosol	57.5	71.13
AT3G04230.1	Thale cress	cytosol, mitochondrion, plastid	85.0	69.86
GSMUA_Achr2P22080_001	Banana	cytosol	63.33	69.09
GSMUA_Achr3P21350_001	Banana	cytosol	55.0	68.75
Solyc04g026100.1.1	Tomato	nucleus	83.33	68.03
Solyc05g005690.1.1	Tomato	nucleus	83.33	68.03
PGSC0003DMT400077257	Potato	cytosol	83.33	68.03
PGSC0003DMT400010554	Potato	cytosol	83.33	68.03
VIT_03s0063g00130.t01	Wine grape	cytosol	80.83	67.36
VIT_05s0020g02990.t01	Wine grape	cytosol	80.83	67.36
Solyc01g068530.2.1	Tomato	nucleus	84.17	67.33
GSMUA_Achr3P01630_001	Banana	cytosol	55.83	67.0
KRH60450	Soybean	nucleus	83.33	63.69
KRH70668	Soybean	nucleus	82.5	63.46
KRH50326	Soybean	cytosol	82.5	63.46
KRH41748	Soybean	nucleus	81.67	63.23
Os11t0127900-01	Rice	plastid	72.5	58.39
Os12t0124200-01	Rice	plastid	72.5	58.39
EES15592	Sorghum	mitochondrion	72.5	58.39
TraesCS4B01G129600.1	Wheat	mitochondrion, plastid	71.67	57.72
TraesCS4D01G123000.1	Wheat	golgi, nucleus, unclear	71.67	57.72
TraesCS4D01G122900.1	Wheat	mitochondrion, plastid	71.67	57.72
TraesCS4B01G129400.1	Wheat	mitochondrion, plastid	71.67	57.72
TraesCS4A01G190500.1	Wheat	plastid	71.67	57.72
TraesCS4A01G190200.1	Wheat	mitochondrion, plastid	71.67	57.72
HORVU4Hr1G023530.1	Barley	mitochondrion, plastid	71.67	57.72
EES09177	Sorghum	mitochondrion	70.83	57.43
TraesCS4A01G323600.1	Wheat	mitochondrion	71.67	57.33
TraesCS5A01G142900.1	Wheat	mitochondrion, plastid	70.83	57.05
TraesCS5B01G141700.1	Wheat	golgi, unclear	70.83	57.05
TraesCS5D01G149100.1	Wheat	mitochondrion, plastid	70.83	57.05
Zm00001d044664_P001	Maize	plastid	70.83	57.05
Zm00001d005023_P001	Maize	plasma membrane, plastid	69.17	56.08
Zm00001d023293_P001	Maize	plasma membrane	69.17	55.7
TraesCS5B01G554700.1	Wheat	cytosol	61.67	55.64
HORVU5Hr1G045620.1	Barley	plastid	70.83	47.75
HORVU4Hr1G023570.2	Barley	mitochondrion	71.67	43.43
CDY25446	Canola	plastid	33.33	40.82
VIT_18s0001g14620.t01	Wine grape	cytosol	49.17	37.58
CDY53247	Canola	mitochondrion	34.17	27.15

Protein Annotations

Gene3D:3.30.230.10	MapMan:35.1	GO:A0A078J4N9	UniProt:A0A078J4N9	EnsemblPlants:CDY61186	ProteinID:CDY61186
ProteinID:CDY61186.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00030702001	InterPro:IPR014721	PFAM:PF00380
PANTHER:PTHR21569	PANTHER:PTHR21569:SF7	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9	SUPFAM:SSF54211
UniParc:UPI0004EE9230	:	:	:	:	:

Description

BnaAnng17430DBnaAnng17430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4N9]

Coordinates

chrLK033966:+:2805..3878

Molecular Weight (calculated)

13544.7 Da

IEP (calculated)

11.009

GRAVY (calculated)

-0.409

Length

120 amino acids

Sequence
(BLAST)

001: MATKPAAESV QCFGRKKTAV AVTHCKRGCG QIKLNGCPIE LFNPEILRFK IFEPVLLLGK HRFAGVDMRI RVNGGGHTSQ EVKDILIRYD RTLLVADPRR
101: CEPKKFGGRG ARSRFQKSYR

Best Arabidopsis Sequence Match ( AT2G09990.1 )
(BLAST)

001: MATQPATESV QCFGRKKTAV AVTHCKRGSG LIKLNGCPIE LFQPEILRFK IFEPILLLGK HRFAGVNMRI RVNGGGHTSQ VYAIRQSIAK ALVAYYQKYV
101: DEQSKKEIKD ILVRYDRTLL VADPRRCEPK KFGGRGARSR YQKSYR

Arabidopsis Description

RPS16A40S ribosomal protein S16-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.