Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g12090.t01 | Wine grape | mitochondrion | 50.0 | 27.94 |
| VIT_04s0008g05960.t01 | Wine grape | mitochondrion | 34.06 | 20.8 |
| VIT_09s0002g08960.t01 | Wine grape | plasma membrane | 31.88 | 19.21 |
| VIT_03s0063g02130.t01 | Wine grape | mitochondrion | 43.48 | 17.91 |
| VIT_11s0016g04860.t01 | Wine grape | cytosol, nucleus, peroxisome | 26.81 | 17.29 |
| VIT_16s0050g01050.t01 | Wine grape | cytosol | 13.77 | 7.82 |
Protein Annotations
| ArrayExpress:VIT_18s0072g01100 | EMBL:FN594968 | EnsemblPlants:VIT_18s0072g01100.t01 | EnsemblPlantsGene:VIT_18s0072g01100 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom |
| PANTHER:PTHR12378 | PANTHER:PTHR12378:SF37 | PFAM:PF05903 | ProteinID:CBI18168 | ProteinID:CBI18168.3 | UniParc:UPI00015CB4D0 |
| UniProt:D7SR87 | MapMan:19.4.1.7 | : | : | : | : |
Description
No Description!
Coordinates
chr18:+:20712960..20713579
Molecular Weight (calculated)
15496.7 Da
IEP (calculated)
5.895
GRAVY (calculated)
0.195
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLCSLLGEA LGDFSICKHY IKFKLLDQDV SINIDPLLAS SLRKHEARIE EIKKVYCASL FEGQINNSFC IFPKVKLVGY GHGSTPVYLN VYDLTPMNGY
101: AYWVGLGIFH SVVEVHGVEY AFGAHDYLTN SVIEVEPF
101: AYWVGLGIFH SVVEVHGVEY AFGAHDYLTN SVIEVEPF
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.