Factsheet for Bra007813.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 3
peroxisome 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, peroxisome, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56277	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	99.82	99.82
Bra032034.1-P	Field mustard	nucleus, plasma membrane	36.86	81.12
AT2G25190.1	Thale cress	nucleus, vacuole	35.4	80.83
KRH05264	Soybean	cytosol, mitochondrion	24.82	62.96
KRH15787	Soybean	mitochondrion	24.45	62.33
VIT_04s0008g05960.t01	Wine grape	mitochondrion	25.55	61.95
Bra009823.1-P	Field mustard	cytosol, mitochondrion	23.54	58.64
KRH61696	Soybean	cytosol	23.18	58.53
KRH52364	Soybean	mitochondrion	23.91	58.48
Bra020487.1-P	Field mustard	mitochondrion	22.63	57.41
Bra011312.1-P	Field mustard	nucleus	24.09	57.39
Bra035161.1-P	Field mustard	cytosol	21.53	51.75
Bra003580.1-P	Field mustard	cytosol	20.62	49.56
Bra012661.1-P	Field mustard	cytosol	16.42	42.06
Bra024951.1-P	Field mustard	cytosol	16.24	36.63
Bra014091.1-P	Field mustard	nucleus	17.88	34.88
Bra032229.1-P	Field mustard	nucleus	17.7	34.77
Bra013908.1-P	Field mustard	cytosol	10.58	23.67
Bra010452.1-P	Field mustard	cytosol	10.95	23.62
Bra013910.1-P	Field mustard	cytosol	10.22	22.31

Protein Annotations

MapMan:19.4.1.7	Gene3D:2.60.120.330	Gene3D:3.90.1720.30	MapMan:9.2.2.4.3	EnsemblPlantsGene:Bra007813	EnsemblPlants:Bra007813.1
EnsemblPlants:Bra007813.1-P	MEROPS:C97.A08	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
UniProt:M4CUB9	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF05903	PFAM:PF14226	InterPro:PPPDE_dom
PFscan:PS51471	PANTHER:PTHR12378	PANTHER:PTHR12378:SF12	SMART:SM01179	SUPFAM:SSF51197	UniParc:UPI0002542CFF
SEG:seg	:	:	:	:	:

Description

AT2G25190 (E=4e-100) | unknown protein

Coordinates

chrA09:-:31008941..31012105

Molecular Weight (calculated)

62050.5 Da

IEP (calculated)

7.707

GRAVY (calculated)

-0.412

Length

548 amino acids

Sequence
(BLAST)

001: MLCWSGSVKR KQKPGPFPVY LNVYDLTPMN AYGYWLGLGV FHSGVEVHGV EYAFGAHEYP STGIFEVEPK KCPGFTFRKS ILVGKTDTCA RDVRVYMEKL
101: AEEYRGNKYN LISRNCNHFC NEVCVKLTQK PLPRWVNRLA RLGVLCNCVL PPRLNESKVR RVVKEELSEG EKKRMRNTSR SGPLLTTSSS SSTPDNNHRS
201: HIRAKSTGNH SSSSMGTKEG QRHCAPQAQD KKSPSGHSLY EDEYIFLSRF TEYTSMARRI SSEIAGESKL YEFSDEILVI SLSGIDDVGG KKEDICPQIM
301: EAFEKWGMVQ AIDHGVDTNL MADMTSLARD FFALTTEEKL RFDMSGEAMK DWREIVMYST YPVSTRDYSR WPDKPEGWLK VTEEYSERLM GLAYKVLEVL
401: SEAMGLEKDA LKNACVDMEQ KIVVNYFPKR PKLDLALGMR HTDHGIITLL LQDQVSCLQA TRDNGNTWVT VPLVPGALVI NLGDIGHEVH DFRPSGGGLK
501: SSKLFINIFF FPAPHATVYP LKVRDGEKTI IEEPISFEEI TMRKLKDL

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.