Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P15920_001 | Banana | cytosol | 82.48 | 83.23 |
| GSMUA_Achr5P04860_001 | Banana | plastid | 63.14 | 74.64 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 65.86 | 71.48 |
| KRH52302 | Soybean | cytosol | 58.31 | 66.78 |
| PGSC0003DMT400067616 | Potato | cytosol | 56.8 | 64.83 |
| KRH61636 | Soybean | cytosol | 57.7 | 64.31 |
| KRH15692 | Soybean | cytosol | 57.4 | 63.76 |
| Bra006077.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 57.4 | 62.71 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 57.4 | 62.71 |
| CDX78399 | Canola | nucleus, plastid | 57.1 | 62.38 |
| AT5G10750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 55.89 | 61.26 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 57.7 | 60.63 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 57.7 | 60.63 |
| Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 58.91 | 60.0 |
| Solyc08g006590.1.1 | Tomato | cytosol | 49.55 | 58.99 |
| OQU76985 | Sorghum | cytosol, extracellular, nucleus | 57.7 | 58.77 |
| Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 57.7 | 58.41 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 55.89 | 57.81 |
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 55.59 | 57.32 |
| TraesCS7B01G325500.1 | Wheat | cytosol | 55.59 | 57.14 |
| KRH05337 | Soybean | cytosol | 44.11 | 53.87 |
| Bra036529.1-P | Field mustard | cytosol | 45.32 | 52.63 |
| HORVU7Hr1G098100.1 | Barley | plastid | 55.59 | 51.98 |
| AT5G25010.1 | Thale cress | cytosol | 42.9 | 49.65 |
| AT5G25020.1 | Thale cress | cytosol | 39.88 | 49.07 |
| AT5G24990.1 | Thale cress | cytosol | 43.5 | 48.98 |
| CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 43.2 | 48.81 |
| Bra009807.1-P | Field mustard | cytosol | 42.9 | 48.46 |
| CDX88148 | Canola | cytosol | 37.76 | 47.35 |
| CDY05382 | Canola | cytosol | 37.76 | 46.47 |
| Bra009809.1-P | Field mustard | cytosol | 39.58 | 46.45 |
| CDX88150 | Canola | cytosol | 39.27 | 46.1 |
| CDX80480 | Canola | cytosol | 28.4 | 45.85 |
| GSMUA_Achr1P11490_001 | Banana | plastid | 36.86 | 30.58 |
| GSMUA_Achr4P18250_001 | Banana | mitochondrion | 27.49 | 29.17 |
| GSMUA_Achr11P... | Banana | cytosol | 29.0 | 17.14 |
| GSMUA_Achr4P12370_001 | Banana | mitochondrion | 34.74 | 15.95 |
| GSMUA_Achr5P17990_001 | Banana | mitochondrion | 35.05 | 15.93 |
| GSMUA_Achr4P05670_001 | Banana | mitochondrion | 33.84 | 15.41 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.05 | 15.3 |
| GSMUA_Achr9P13170_001 | Banana | nucleus | 33.23 | 14.65 |
| GSMUA_Achr1P08990_001 | Banana | nucleus | 29.91 | 14.2 |
| GSMUA_Achr5P14640_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 29.31 | 13.18 |
| GSMUA_Achr2P00220_001 | Banana | nucleus | 26.59 | 12.9 |
| GSMUA_Achr4P18260_001 | Banana | mitochondrion | 2.42 | 1.83 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P21900_001 | EnsemblPlants:GSMUA_Achr5T21900_001 | EnsemblPlantsGene:GSMUA_Achr5G21900_001 | InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF38 |
| PFAM:PF07059 | SEG:seg | UniParc:UPI000296E878 | UniProt:M0T0L5 | MapMan:35.1 | : |
Description
EDR2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G21900_001]
Coordinates
chr5:-:24039726..24042699
Molecular Weight (calculated)
36069.6 Da
IEP (calculated)
7.126
GRAVY (calculated)
-0.398
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MCPTTKKPAD TAGQRGGEPP PPEPARAAED PCYDWRQEAI EGGSLRHVDL DTGTNGWASP PGDLFHLRGL NYFARRQKCP SGEWLLEPAG VDWLRSASRL
101: DDVLGRPDNR VAAALRRTQA LGGARKAFLF AVNLQVPGRE CHSAVFYFAA VEPIPPGSLF YRFVHGDDAF RNSRFKIVNR IVKGPWIVRA AVGNHAACLL
201: GKALTCNYHR GENYLEIDVD IGSSAIANAI LHLALGYVTA VTIDMGFLVE AQAEEELPER LLGAVRVAQM EMSSATYVET KPKATEAGKT GFWGPAKVNH
301: HHQHHPDRCS GAKPSRSGVG KDGDDEDNFP P
101: DDVLGRPDNR VAAALRRTQA LGGARKAFLF AVNLQVPGRE CHSAVFYFAA VEPIPPGSLF YRFVHGDDAF RNSRFKIVNR IVKGPWIVRA AVGNHAACLL
201: GKALTCNYHR GENYLEIDVD IGSSAIANAI LHLALGYVTA VTIDMGFLVE AQAEEELPER LLGAVRVAQM EMSSATYVET KPKATEAGKT GFWGPAKVNH
301: HHQHHPDRCS GAKPSRSGVG KDGDDEDNFP P
001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
Arabidopsis Description
At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.