Factsheet for GSMUA_Achr1P11490_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G299000.1	Wheat	cytosol	51.38	66.34
TraesCS7A01G303600.1	Wheat	cytosol	51.38	66.34
TraesCS7B01G203900.1	Wheat	cytosol	51.13	66.02
HORVU7Hr1G072050.4	Barley	cytosol	50.88	64.24
TraesCS2A01G242800.1	Wheat	cytosol	48.87	63.11
KRH23216	Soybean	cytosol	34.34	61.99
KRH24608	Soybean	cytosol	48.12	61.94
AT1G06050.1	Thale cress	cytosol	47.62	60.7
PGSC0003DMT400042135	Potato	cytosol	47.37	59.81
Bra015470.1-P	Field mustard	cytosol	45.86	59.42
VIT_05s0102g00770.t01	Wine grape	cytosol	51.63	57.22
Os08t0152600-01	Rice	cytosol	50.88	56.23
KRH10121	Soybean	endoplasmic reticulum, golgi	49.37	56.13
KXG24431	Sorghum	plastid	55.64	55.64
Solyc06g053360.2.1	Tomato	cytosol	41.1	53.77
KRH29613	Soybean	cytosol	39.35	53.04
Zm00001d024605_P001	Maize	mitochondrion	56.39	51.84
GSMUA_Achr7P15920_001	Banana	cytosol	31.33	38.11
GSMUA_Achr5P21900_001	Banana	cytosol	30.58	36.86
GSMUA_Achr5P04860_001	Banana	plastid	25.31	36.07
CDY10168	Canola	nucleus	46.12	32.62
GSMUA_Achr4P18250_001	Banana	mitochondrion	20.8	26.6
GSMUA_Achr9P13170_001	Banana	nucleus	28.32	15.05
GSMUA_Achr11P...	Banana	cytosol	21.05	15.0
GSMUA_Achr4P05670_001	Banana	mitochondrion	26.57	14.58
GSMUA_Achr5P17990_001	Banana	mitochondrion	26.07	14.29
GSMUA_Achr4P12370_001	Banana	mitochondrion	25.56	14.15
GSMUA_Achr11P...	Banana	mitochondrion	25.81	13.59
GSMUA_Achr1P08990_001	Banana	nucleus	23.56	13.49
GSMUA_Achr2P00220_001	Banana	nucleus	21.3	12.46
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	22.06	11.96
GSMUA_Achr4P18260_001	Banana	mitochondrion	3.01	2.75

Protein Annotations

EnsemblPlants:GSMUA_Achr1P11490_001	EnsemblPlants:GSMUA_Achr1T11490_001	EnsemblPlantsGene:GSMUA_Achr1G11490_001	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61
PFAM:PF07059	SEG:seg	UniParc:UPI0002955914	UniProt:M0RZ08	MapMan:35.1	:

Description

DUF1336 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G11490_001]

Coordinates

chr1:+:8816691..8821683

Molecular Weight (calculated)

44147.7 Da

IEP (calculated)

6.642

GRAVY (calculated)

-0.228

Length

399 amino acids

Sequence
(BLAST)

001: MYTILLNVSN NLVSHTKKGM CPTMQQTLKP LRHAMHGRHH QSTVLLYVEQ NRWHARACGV DAINIDVKTV GSSKRYSLIL CFQHMAGPDC ERDYSWIEKV
101: KSGGSVPCLE PENCSNGWAT PPGDKFMIRG PNYLSDKVKI PGGGYILKPL GFDWIKGPTK IGNLLSNTNH RVRRAIDDET ARGNNPFVWA FNLQIPSKDN
201: YSAIAYFVAL EPIQDGILVD KFLKGDDTFR NSRLKLIANI VEGPWIVRTA VGEQAICILG RALSCKYMSE SNYFEVDVDI GSSMVANAIV HLAFSYLTTL
301: TVDLAFLIES QTQEELPEQI LGAVRFSELN PDSAGLHELS SEVGSGSLQS SLPTRLWKSI GLGLPQLLHL GTQDFSSPIS DNANGGLHSE ADEKNNENW

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.