CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29613	Soybean	cytosol	78.06	81.76
KRH23216	Soybean	cytosol	53.23	74.66
KRH10121	Soybean	endoplasmic reticulum, golgi	77.1	68.09
AT1G06050.1	Thale cress	cytosol	62.58	61.98
VIT_05s0102g00770.t01	Wine grape	cytosol	70.97	61.11
TraesCS7D01G299000.1	Wheat	cytosol	60.65	60.84
TraesCS7B01G203900.1	Wheat	cytosol	60.65	60.84
TraesCS7A01G303600.1	Wheat	cytosol	60.65	60.84
HORVU7Hr1G072050.4	Barley	cytosol	61.61	60.44
TraesCS2A01G242800.1	Wheat	cytosol	59.03	59.22
PGSC0003DMT400042135	Potato	cytosol	60.32	59.18
Bra015470.1-P	Field mustard	cytosol	57.74	58.12
Os08t0152600-01	Rice	cytosol	59.68	51.25
Solyc06g053360.2.1	Tomato	cytosol	50.32	51.15
GSMUA_Achr1P11490_001	Banana	plastid	61.94	48.12
KXG24431	Sorghum	plastid	60.32	46.87
Zm00001d024605_P001	Maize	mitochondrion	61.29	43.78
KRH52302	Soybean	cytosol	38.06	40.83
KRH61636	Soybean	cytosol	37.74	39.39
KRH15692	Soybean	cytosol	37.42	38.93
KRG90499	Soybean	extracellular	8.71	36.99
KRH05337	Soybean	cytosol	29.03	33.21
CDY10168	Canola	nucleus	58.06	31.91
KRH12970	Soybean	cytosol	34.52	14.62
KRH20109	Soybean	cytosol, nucleus	35.16	14.59
KRH03545	Soybean	nucleus	34.84	14.54
KRH76356	Soybean	mitochondrion	30.65	13.07
KRH39650	Soybean	mitochondrion	30.32	12.95
KRH08525	Soybean	cytosol	29.35	12.6
KRH22877	Soybean	plastid	27.42	11.52
KRH34863	Soybean	cytosol, mitochondrion, nucleus, plastid	26.77	11.51
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	26.77	11.28

Protein Annotations

EMBL:ACUP02007179	EnsemblPlants:KRH24608	EnsemblPlantsGene:GLYMA_12G051400	EntrezGene:100795873	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61	PFAM:PF07059	ProteinID:KRH24608
ProteinID:KRH24608.1	UniParc:UPI00029620E1	UniProt:K7LT55	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr12:+:3695862..3698086

Molecular Weight (calculated)

34065.8 Da

IEP (calculated)

8.582

GRAVY (calculated)

-0.232

Length

310 amino acids

Sequence
(BLAST)

001: MAGPDDPKKS EWIDRIKSEG SIPLLDPDNC SNGWASPPGA AFKIRGPEYL TTKAKIPAGD YLLKPLGFDW IKSSVKMGEI LKHSNSRVRK VIDNEFPAGD
101: KPFVWAFNIQ LPTKDNYSAV AYFTNKEPIA EGSLMDKFLK GDDAFRNSRL KMIANIVNGP WIVRKAVGEQ AICIIGRALF CKYCVAENFI EVDIDIGSSM
201: VATAIVHLAF GYVTTLTVDL AFLIESQTES ELPEKLLGAF RFSNLNPASA RQIDPSSVLS TGGLQKSLSK RLWKSIGQIL LPGSKEDDST SGSQNTKIVD
301: HKNSSTDFKK

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.