Factsheet for VIT_05s0102g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24608	Soybean	cytosol	61.11	70.97
KRH23216	Soybean	cytosol	43.06	70.14
PGSC0003DMT400042135	Potato	cytosol	60.0	68.35
TraesCS7D01G299000.1	Wheat	cytosol	56.67	66.02
TraesCS7B01G203900.1	Wheat	cytosol	56.67	66.02
TraesCS7A01G303600.1	Wheat	cytosol	56.39	65.7
HORVU7Hr1G072050.4	Barley	cytosol	56.67	64.56
AT1G06050.1	Thale cress	cytosol	56.11	64.54
KRH10121	Soybean	endoplasmic reticulum, golgi	62.5	64.1
TraesCS2A01G242800.1	Wheat	cytosol	54.17	63.11
Bra015470.1-P	Field mustard	cytosol	53.89	62.99
Solyc06g053360.2.1	Tomato	cytosol	53.06	62.62
KRH29613	Soybean	cytosol	50.83	61.82
Os08t0152600-01	Rice	cytosol	57.22	57.06
KXG24431	Sorghum	plastid	58.06	52.38
GSMUA_Achr1P11490_001	Banana	plastid	57.22	51.63
Zm00001d024605_P001	Maize	mitochondrion	56.67	47.0
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	34.17	40.33
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	14.17	36.43
CDY10168	Canola	nucleus	55.56	35.46
VIT_15s0107g00410.t01	Wine grape	cytosol	26.39	17.12
VIT_02s0033g00080.t01	Wine grape	mitochondrion	26.94	13.66
VIT_02s0033g00120.t01	Wine grape	cytosol	24.17	11.85
VIT_06s0004g02720.t01	Wine grape	cytosol	23.06	11.31
VIT_15s0107g00440.t01	Wine grape	cytosol	4.44	4.69

Protein Annotations

ArrayExpress:VIT_05s0102g00770	EMBL:FN596500	EnsemblPlants:VIT_05s0102g00770.t01	EnsemblPlantsGene:VIT_05s0102g00770	EntrezGene:100247353	EntrezGene:LOC100247353
GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61
PFAM:PF07059	ProteinID:CBI36694	ProteinID:CBI36694.3	RefSeq:XP_002268865	RefSeq:XP_002268865.1	UniParc:UPI0001BE48E2
UniProt:D7U1S8	wikigene:100247353	wikigene:LOC100247353	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5:-:22669058..22679588

Molecular Weight (calculated)

39863.4 Da

IEP (calculated)

4.665

GRAVY (calculated)

-0.188

Length

360 amino acids

Sequence
(BLAST)

001: MTNLDQKNEH EWIERVKAEG AVPLLEPDNC PNGWASPPGD KFMVRGPDYF STRIKIPGGE CLLKPLGFDW IRGSTKIWEI LNHPNSRVRK ALEEEFPEGD
101: KPFVWAFNLQ VPNKDNYSAV AYFLATEPIP EGSLMEQFLK GDDGFRNSRL KLIANIVQGP WIVRKAVGEQ AICIIGRALT CKYCVSDNFI EVDVDIGSSM
201: VASAIVHLAF GYITTLTVDL AFLIESQTES ELPERILGAV RFSELNPASA RPFETSTEET TGSLQSSLPT RLWKSIGQGF SNLLQGAPES GSVSGSSRAN
301: GIVDHEESGE DIKKCLYTIK FLFLFVMFTP KKEMNAGEDN PFAANQNLLI SPSTSISEIF

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.