Factsheet for VIT_02s0033g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00120.t01	Wine grape	cytosol	88.73	85.83
KRG90499	Soybean	extracellular	8.59	83.56
KRH76356	Soybean	mitochondrion	84.37	82.39
KRH39650	Soybean	mitochondrion	83.66	81.82
Solyc12g096050.1.1	Tomato	mitochondrion	82.25	80.66
Bra013371.1-P	Field mustard	mitochondrion	80.99	80.08
CDX78916	Canola	mitochondrion	80.99	80.08
AT4G19040.2	Thale cress	mitochondrion	81.41	79.94
CDX99399	Canola	mitochondrion	80.7	79.81
CDY01578	Canola	mitochondrion	80.42	79.75
AT5G45560.1	Thale cress	mitochondrion	80.42	79.42
CDX98603	Canola	mitochondrion	80.28	79.39
Bra017600.1-P	Field mustard	mitochondrion, nucleus	79.72	78.83
CDY13045	Canola	mitochondrion	79.58	78.69
CDY23114	Canola	mitochondrion	79.44	78.55
GSMUA_Achr5P17990_001	Banana	mitochondrion	78.59	76.65
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	14.93	75.71
Solyc08g005410.2.1	Tomato	cytosol	74.37	74.47
PGSC0003DMT400047520	Potato	cytosol	74.23	73.81
TraesCS7D01G523200.2	Wheat	plastid	74.08	72.55
EER94411	Sorghum	cytosol, nucleus, plastid	74.37	72.23
TraesCS7B01G458700.1	Wheat	cytosol, plastid	73.52	72.0
GSMUA_Achr11P...	Banana	mitochondrion	76.48	71.64
HORVU7Hr1G117780.12	Barley	plastid	73.8	70.52
TraesCS7A01G538600.2	Wheat	cytosol, plastid	74.23	69.89
VIT_15s0107g00410.t01	Wine grape	cytosol	54.08	69.19
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	66.48	65.19
VIT_15s0107g00440.t01	Wine grape	cytosol	30.0	62.46
Bra012558.1-P	Field mustard	cytosol	77.89	41.74
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	15.63	36.39
VIT_06s0004g02720.t01	Wine grape	cytosol	31.69	30.65
VIT_05s0102g00770.t01	Wine grape	cytosol	13.66	26.94

Protein Annotations

EntrezGene:100246589	wikigene:100246589	Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	ProteinID:CBI37373
ProteinID:CBI37373.3	UniProt:D7U3Q4	InterPro:EDR2_C	EMBL:FN596505	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	EntrezGene:LOC100246589
wikigene:LOC100246589	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003
PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	TIGR:TC54586	UniParc:UPI00015CB59E	ArrayExpress:VIT_02s0033g00080
EnsemblPlantsGene:VIT_02s0033g00080	EnsemblPlants:VIT_02s0033g00080.t01	RefSeq:XP_002262725	RefSeq:XP_002262725.1	RefSeq:XP_002262787	RefSeq:XP_002262787.1
RefSeq:XP_003631511	RefSeq:XP_003631511.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:13478738..13525353

Molecular Weight (calculated)

81229.5 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.472

Length

710 amino acids

Sequence
(BLAST)

001: MVRCGRRKIG RSYIHMRYFV LESRLLAYYK RKPQHNVVPI KTLLIDGNCR VEDRGLKTHH GYMVYVLSIY NKKEKYHRIT MAAFNIQEAL LWKEKIESVI
101: DQHQDLQVAN GNKYISFEYK SGMDNGRAAS SSDHESQFSA QDDEEDTHRD LVRRKTIGNG IPDSVLDWTR EIDSELSNQN INNQAFSRKH WRLLQCQNGL
201: RIFEELLEVD YLPRSCSRAM KAVGVVEATC EEIFELVMSM DGKRFEWDCS FQDGSLVEEV DGHTAILYHR LQLDWFPMFV WPRDLCYVRY WRRNDDGSYV
301: VLFRSREHEN CGPQPGFVRA HLESGGFNIS PLKPRNGRPR TQVQHLLQID LKGWGAGYIS SFQQHCLLQV LNSVAGLREW FSQTDERNAQ PRIPVMVNMA
401: SASVTSKKNQ KPQEYSDQSN ATGRNSMMMD EDSDEDEEFQ VPEREQEAYS MSLQNEVKGT AMEEEPQDKI DVSCFSGNLR RDDRDKGRDC WTISDGNNFR
501: VRCKHFFYDK TKIPAGKHLM DLVAVDWFKD SKRIDHVARR QGCAAQVASE KGLFSIIINL QVPGSTHYSM VFYFVSKELV TGSLLQRFVD GDDEFRNSRL
601: KLIPSVPKGS WIVRQSVGST PCLLGKAVDC NYIRGPKYLE IDVDIGSSTV ANGVLGLVCG VITTLVVDMA FLVQANTVDE LPERLIGAVR VSHVELSSAI
701: VPKLDPDTCA

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.