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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • nucleus 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH76356 Soybean mitochondrion 98.35 98.21
VIT_02s0033g00080.t01 Wine grape mitochondrion 81.82 83.66
KRG90499 Soybean extracellular 8.4 83.56
Bra013371.1-P Field mustard mitochondrion 79.61 80.5
CDX78916 Canola mitochondrion 79.61 80.5
Solyc12g096050.1.1 Tomato mitochondrion 80.03 80.25
CDX99399 Canola mitochondrion 79.34 80.22
CDY01578 Canola mitochondrion 78.51 79.61
AT4G19040.2 Thale cress mitochondrion 78.65 78.98
CDX98603 Canola mitochondrion 77.96 78.83
AT5G45560.1 Thale cress mitochondrion 77.55 78.3
VIT_02s0033g00120.t01 Wine grape cytosol 78.93 78.07
Bra017600.1-P Field mustard mitochondrion, nucleus 77.0 77.86
CDY13045 Canola mitochondrion 76.86 77.72
CDY23114 Canola mitochondrion 76.72 77.58
GSMUA_Achr5P17990_001 Banana mitochondrion 77.69 77.47
Solyc08g005410.2.1 Tomato cytosol 73.83 75.6
PGSC0003DMT400047520 Potato cytosol 73.97 75.21
VIT_02s0033g00160.t01 Wine grape cytosol, extracellular 14.33 74.29
EER94411 Sorghum cytosol, nucleus, plastid 73.55 73.05
TraesCS7D01G523200.2 Wheat plastid 72.86 72.97
TraesCS7B01G458700.1 Wheat cytosol, plastid 72.59 72.69
GSMUA_Achr11P... Banana mitochondrion 75.48 72.3
HORVU7Hr1G117780.12 Barley plastid 72.31 70.66
TraesCS7A01G538600.2 Wheat cytosol, plastid 73.0 70.29
VIT_15s0107g00410.t01 Wine grape cytosol 51.1 66.85
Zm00001d014442_P007 Maize cytosol, nucleus, plasma membrane, plastid 65.29 65.47
Os10t0455900-01 Rice plasma membrane 27.55 63.49
Bra012558.1-P Field mustard cytosol 74.93 41.06
KRH52302 Soybean cytosol 15.43 38.75
KRH61636 Soybean cytosol 15.84 38.72
KRH15692 Soybean cytosol 15.84 38.59
KRH05337 Soybean cytosol 12.67 33.95
KRH22877 Soybean plastid 32.23 31.71
KRH26439 Soybean cytosol, extracellular, nucleus, plastid 32.09 31.66
KRH34863 Soybean cytosol, mitochondrion, nucleus, plastid 31.27 31.48
KRH08525 Soybean cytosol 30.72 30.89
KRH24608 Soybean cytosol 12.95 30.32
KRH03545 Soybean nucleus 30.58 29.88
KRH23216 Soybean cytosol 9.09 29.86
KRH20109 Soybean cytosol, nucleus 30.17 29.32
KRH12970 Soybean cytosol 28.93 28.69
KRH10121 Soybean endoplasmic reticulum, golgi 13.22 27.35
KRH29613 Soybean cytosol 10.61 26.01
Protein Annotations
EntrezGene:100808706Gene3D:2.30.29.30Gene3D:3.30.530.20MapMan:35.1EMBL:ACUP02005951InterPro:EDR2_C
EnsemblPlantsGene:GLYMA_09G212100GO:GO:0003674GO:GO:0005488GO:GO:0008289InterPro:IPR001849InterPro:IPR002913
InterPro:IPR011993InterPro:IPR023393UniProt:K7LF69EnsemblPlants:KRH39650ProteinID:KRH39650ProteinID:KRH39650.1
PFAM:PF01852PFAM:PF07059InterPro:PH-like_dom_sfInterPro:PH_domainPFscan:PS50003PFscan:PS50848
PANTHER:PTHR12136PANTHER:PTHR12136:SF47SMART:SM00233SMART:SM00234SUPFAM:SSF50729SUPFAM:SSF55961
InterPro:START-like_dom_sfInterPro:START_lipid-bd_domUniParc:UPI000294CF12SEG:seg::
Description
hypothetical protein
Coordinates
chr9:-:43601741..43615233
Molecular Weight (calculated)
83176.7 Da
IEP (calculated)
6.950
GRAVY (calculated)
-0.484
Length
726 amino acids
Sequence
(BLAST)
001: MSSKVVYEGW MVRYGRRKIG RSFIHMRYFV LESRLLAYYK RKPQDNQVPI KTLLIDGNCR VEDRGLKAHH GHMVYVLLFY NKKEKNHRIM MAAFNIQEAL
101: IWKEKIEYVI DQHQGAQPSN GNKYISFEYK SGMDNGKTAS SSDRESQFSA QEDEDEPHPN LLRRTTIGNG PPESVFDWTR EIDSDLSNQN INNQAFSRKH
201: WRLLQCQDGL RIFEELGEVD YLPRSFSKAM KAVGVVEATC EEIFELVMSM DGTRFEWDCS FLHGSLVEEV DGHTAVLYHR LQLDWFPMFV WPRDLCYVRY
301: WRRNDDGSYV VLFRSREHEN CGPQPGCVRA HIESGGFNIS PLKPRNGRPR TQVQHLMQID LKGWGVGYLS SFQQYCVRQM LNSVAGLREW FAQSDERHAH
401: PRIPVMVNMS STAVSSKKNQ KPNDFSVNPT SLDQMNAASR SSALIDEYSD DEEDFQIAEP EQEAYQIGLE NDVRKTALEE EPAHEIDFSS FSGNLRRDDR
501: DNARDCWKIS DGNNFRVRSK HYCYDKTKKV PAGKHMLDLV AVDWFKDSKR MDHVVRRHGC AAQVASEKGF FSIVINLQVP ASTHYSMVFY FVTKELVSGS
601: LLHRFVDGDD EFRNSRFKLI PSVPKGSWIV RQSVGSTPCL LGKAVDCNYI RGPKYLEIDV DIGSSTVANG VLGLVIGVIT TLVVDMAFLV QANTPDELPE
701: RLIGAVRISH LELKSAIIPK LESDPS
Best Arabidopsis Sequence Match ( AT5G45560.1 )
(BLAST)
001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDNQLPIK TMVIDGNCRV EDRGLKTHHG HMVYVLSIYN KKEKHHRITM AAFNIQEALM
101: WKEKIECVID QHQDSLVPSG QQYVSFEYKP GMDAGRTASS SDHESPFSAL EDENDSQRDL LRRTTIGNGP PESILDWTKE FDAELSNQSS SNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELVMSMD GTRYEWDCSF HNGRLVEEVD GHTAILYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGFVRAH LESGGFNIAP LKPRNGRPRT QVQHLIQIDL KGWGSGYLPA FQQHCLLQML NSVSGLREWF SQTDDRGQPI
401: RIPVMVNMAS SSLALGKGGK HHHKSSLSID QTNGASRNSV LMDEDSDDDD EFQIPDSEPE PETSKQDQET DAKKTEEPAL NIDLSCFSGN LRHDDNENAR
501: NCWRISDGNN FKVRGKSFCD DKRKIPAGKH LMDLVAVDWF KDTKRMDHVV RRKGCAAQVA AEKGLFSTVV NVQVPGSTHY SMVFYFVTKE LVPGSLFQRF
601: VDGDDEFRNS RLKLIPLVPK GSWIVRQSVG STPCLLGKAV DCNYIRGPTY LEIDVDIGSS TVANGVLGLV IGVITSLVVE MAFLVQANTP EELPERLIGA
701: VRVSHVELSS AIVPNLDSD
Arabidopsis Description
EDR2LProtein ENHANCED DISEASE RESISTANCE 2-like [Source:UniProtKB/Swiss-Prot;Acc:Q8VZF6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.