CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus, cytosol

Predictor Summary:

plastid 3
extracellular 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22877	Soybean	plastid	96.6	96.34
Os10t0479800-01	Rice	cytosol	14.54	89.17
VIT_06s0004g02720.t01	Wine grape	cytosol	77.85	78.07
GSMUA_Achr4P18250_001	Banana	mitochondrion	31.39	74.04
Solyc11g069530.1.1	Tomato	cytosol	72.15	72.74
PGSC0003DMT400062486	Potato	nucleus	71.33	71.72
CDY04553	Canola	cytosol	69.84	70.31
CDX71361	Canola	cytosol	69.84	70.12
Solyc06g075130.2.1	Tomato	nucleus	67.53	70.0
Bra011959.1-P	Field mustard	cytosol	69.7	69.99
AT2G28320.1	Thale cress	cytosol	69.7	69.61
TraesCS1D01G155000.1	Wheat	nucleus	69.16	67.06
TraesCS1B01G173600.1	Wheat	nucleus	68.89	66.8
TraesCS1A01G156500.1	Wheat	nucleus	68.89	66.8
GSMUA_Achr1P08990_001	Banana	nucleus	62.91	66.43
EER91476	Sorghum	nucleus	69.02	66.41
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	65.9	65.9
GSMUA_Achr11P...	Banana	cytosol	49.86	65.54
Zm00001d032685_P001	Maize	nucleus	67.26	64.54
HORVU1Hr1G041740.29	Barley	extracellular, nucleus, plasma membrane	66.71	63.27
KRH34863	Soybean	cytosol, mitochondrion, nucleus, plastid	61.14	62.41
GSMUA_Achr2P00220_001	Banana	nucleus	57.34	61.88
KRH08525	Soybean	cytosol	57.61	58.73
KRG90499	Soybean	extracellular	4.89	49.32
KRH52302	Soybean	cytosol	12.64	32.18
KRH39650	Soybean	mitochondrion	31.66	32.09
KRH76356	Soybean	mitochondrion	31.66	32.05
KRH61636	Soybean	cytosol	12.77	31.65
KRH15692	Soybean	cytosol	12.64	31.21
KRH12970	Soybean	cytosol	27.99	28.14
KRH03545	Soybean	nucleus	27.31	27.05
KRH20109	Soybean	cytosol, nucleus	27.31	26.91
KRH24608	Soybean	cytosol	11.28	26.77
KRH23216	Soybean	cytosol	8.02	26.7
KRH05337	Soybean	cytosol	9.51	25.83
KRH10121	Soybean	endoplasmic reticulum, golgi	11.96	25.07
KRH29613	Soybean	cytosol	9.51	23.65

Protein Annotations

EntrezGene:100779206	Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EMBL:ACUP02007714	InterPro:EDR2_C
EnsemblPlantsGene:GLYMA_12G174400	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	UniProt:I1LTK2	InterPro:IPR001849
InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	EnsemblPlants:KRH26439	ProteinID:KRH26439	ProteinID:KRH26439.1
ProteinID:KRH26440.1	PFAM:PF00169	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain
PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	SMART:SM00233	SMART:SM00234
SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00023CFF37	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:33156448..33164238

Molecular Weight (calculated)

82689.8 Da

IEP (calculated)

6.983

GRAVY (calculated)

-0.382

Length

736 amino acids

Sequence
(BLAST)

001: MASSGAATAA LQSDASSRME GWLYLIRFNR IGLQFSRKRY FVLDGNLLRS FKSVPVSNNQ DPVRSAIVDS CIRVMDNGRE SVNRKVFFIF TLYNTSNHND
101: QLKFGASRPE EAARWIQSFH EASLRGAPDG GDDAVGCSKR RWQSFRLSGS SSSISHPNSV DWTLSSADVI APSPWTIFGC QNGLRLFKEA KDRDSNGKKW
201: DDHPAIMAVG VVDGTSEAIF QTLMSLGPSR SEWDFCFYKG NVVEHLDGHT DIIHKQLFSD WLPWGMKRRD LLLRRYWRRE DDGTYVILYH SVFHKKCPPQ
301: KGYVRACLKS GGYVISPVNK GKQSVVKHML AIDWKCWRSY LKSSSAHSIT IRMLGRVAAL RELFKARLGN CSSSDYSSGE LTRNSELHIK EEVIINSDTE
401: IQADENNHDN SVGEVDQTQS EHACLVTLND ADDEFYDVPE PSDCDESENG WMTECSQQKS QDIRHQKLST AANFVKRLHD LAVQKRGYVD LQEMVREDSI
501: TCSYGSTLPQ DPTCTLPCSL TETDPYTFLI RGENYLEDRQ KVKAKGTLMK MVAADWVRSD KREDDLGGRP GSIAQKYAAQ GGPEFFFIVN IQVPGSTTYS
601: LALYYMMNTP VEDAPLLESF IKGDDAFRNS RFKLIPYISK GSWIVKQSVG KKACLVGQAL EINYFQGSNY LELGVDIGSS TVARGVVSLV LGYLNHLVIE
701: MAFLIQGNTR EELPEFLLGT CRLNHLDASK AVCLTL

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.