Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0479800-01 | Rice | cytosol | 13.97 | 85.0 |
| Solyc06g075130.2.1 | Tomato | nucleus | 78.08 | 80.28 |
| VIT_06s0004g02720.t01 | Wine grape | cytosol | 79.18 | 78.75 |
| GSMUA_Achr4P18250_001 | Banana | mitochondrion | 31.64 | 74.04 |
| CDY04553 | Canola | cytosol | 72.47 | 72.37 |
| KRH22877 | Soybean | plastid | 73.01 | 72.22 |
| KRH26439 | Soybean | cytosol, extracellular, nucleus, plastid | 72.74 | 72.15 |
| Bra011959.1-P | Field mustard | cytosol | 72.33 | 72.03 |
| CDX71361 | Canola | cytosol | 72.33 | 72.03 |
| AT2G28320.1 | Thale cress | cytosol | 71.78 | 71.1 |
| GSMUA_Achr11P... | Banana | cytosol | 51.64 | 67.32 |
| GSMUA_Achr1P08990_001 | Banana | nucleus | 64.25 | 67.29 |
| TraesCS1D01G155000.1 | Wheat | nucleus | 69.45 | 66.8 |
| TraesCS1A01G156500.1 | Wheat | nucleus | 69.18 | 66.53 |
| GSMUA_Achr5P14640_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 66.99 | 66.44 |
| TraesCS1B01G173600.1 | Wheat | nucleus | 69.04 | 66.4 |
| EER91476 | Sorghum | nucleus | 69.45 | 66.27 |
| GSMUA_Achr2P00220_001 | Banana | nucleus | 60.0 | 64.22 |
| Solyc04g025280.2.1 | Tomato | cytosol | 51.23 | 64.04 |
| Zm00001d032685_P001 | Maize | nucleus | 67.26 | 64.02 |
| HORVU1Hr1G041740.29 | Barley | extracellular, nucleus, plasma membrane | 67.26 | 63.27 |
| Solyc08g005410.2.1 | Tomato | cytosol | 31.64 | 32.58 |
| Solyc08g006590.1.1 | Tomato | cytosol | 12.33 | 32.37 |
| Solyc12g096050.1.1 | Tomato | mitochondrion | 31.51 | 31.77 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 13.29 | 30.79 |
| Solyc07g005000.2.1 | Tomato | cytosol | 28.49 | 27.62 |
| Solyc06g053360.2.1 | Tomato | cytosol | 10.0 | 23.93 |
Protein Annotations
| Gene3D:2.30.29.30 | Gene3D:3.30.530.20 | MapMan:35.1 | InterPro:EDR2_C | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008289 | InterPro:IPR001849 | InterPro:IPR002913 | InterPro:IPR011993 | InterPro:IPR023393 | UniProt:K4DAA9 |
| PFAM:PF00169 | PFAM:PF01852 | PFAM:PF07059 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PFscan:PS50003 |
| PFscan:PS50848 | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF86 | SMART:SM00233 | SMART:SM00234 | SUPFAM:SSF50729 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:Solyc11g069530.1 | EnsemblPlants:Solyc11g069530.1.1 | UniParc:UPI000276AAC5 |
Description
No Description!
Coordinates
chr11:-:54141317..54151471
Molecular Weight (calculated)
82254.0 Da
IEP (calculated)
6.867
GRAVY (calculated)
-0.322
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSQADHSR MEGWLYLIRS NRFGLQYSRK RYFILQDQFL KSYKSVPVPE NEDPIRSAVV DSCIRVTDNG RESIQRKVFF IFTLYNTSNH NDQLKLGASS
101: PEEAARWIQA VQEAALKVDV NRGKEVDFSS SGSQSLRLNC SNKSNRLNSI DWTVCSSSVT DAMTSDVVAP SPWTIFGCEN GLRLFKEAKD RESLGKWDDH
201: PAIMAVGVVD GTSEAIFQTL MSLGSSRSEW DFCFYKGSVI EHLDGHTDIV HKLLNQDWLP WGMTRRDLLL QRYWRREDDG TYVILYHSVF HQKCAPQKGY
301: VRACLKSGGY VISPVNQGKG SVVKHMLAID WKFWKSYVRT SAARSITIRM LGRLAALREL FSAKIGNYLP SDVSGELIKS KRLCQVEEEI KLEVQTRLEN
401: GKSVADLEEE VVKTPSSLMG LNDAADEFFD VSEPLDYDQT ENDWSSDFGL ETYSQDARHP KLSTAAVIVK RLHDLAVQKK GYVDLHEMVK EDASFCHYGS
501: TLPKDSTCNL PCSWTETDPS TFLIRGETYL DDRKKIKAKG TLMQMVGADW LKSDKREDDL GGRPGGIVQK YAAKGGPEFF FIVNIQVPGL TTYTLALYYM
601: MDTPLEDSPL LESFVKGDDA YRNSRFKLIP YISKGSWIVK QSVGKKACLI GQALEINYFR GKNYIELGID IGSSTVARGV VSLVVGYLNN LVIEMAFLVQ
701: ANTPEELPEY LLGTCRLNHL DVSKAVQVKP
101: PEEAARWIQA VQEAALKVDV NRGKEVDFSS SGSQSLRLNC SNKSNRLNSI DWTVCSSSVT DAMTSDVVAP SPWTIFGCEN GLRLFKEAKD RESLGKWDDH
201: PAIMAVGVVD GTSEAIFQTL MSLGSSRSEW DFCFYKGSVI EHLDGHTDIV HKLLNQDWLP WGMTRRDLLL QRYWRREDDG TYVILYHSVF HQKCAPQKGY
301: VRACLKSGGY VISPVNQGKG SVVKHMLAID WKFWKSYVRT SAARSITIRM LGRLAALREL FSAKIGNYLP SDVSGELIKS KRLCQVEEEI KLEVQTRLEN
401: GKSVADLEEE VVKTPSSLMG LNDAADEFFD VSEPLDYDQT ENDWSSDFGL ETYSQDARHP KLSTAAVIVK RLHDLAVQKK GYVDLHEMVK EDASFCHYGS
501: TLPKDSTCNL PCSWTETDPS TFLIRGETYL DDRKKIKAKG TLMQMVGADW LKSDKREDDL GGRPGGIVQK YAAKGGPEFF FIVNIQVPGL TTYTLALYYM
601: MDTPLEDSPL LESFVKGDDA YRNSRFKLIP YISKGSWIVK QSVGKKACLI GQALEINYFR GKNYIELGID IGSSTVARGV VSLVVGYLNN LVIEMAFLVQ
701: ANTPEELPEY LLGTCRLNHL DVSKAVQVKP
001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
Arabidopsis Description
Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.