Factsheet for TraesCS1A01G156500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G155000.1	Wheat	nucleus	99.21	99.21
TraesCS1B01G173600.1	Wheat	nucleus	98.95	98.95
Os10t0479800-01	Rice	cytosol	15.55	98.33
HORVU1Hr1G041740.29	Barley	extracellular, nucleus, plasma membrane	89.86	87.89
EER91476	Sorghum	nucleus	87.62	86.93
Zm00001d032685_P001	Maize	nucleus	84.85	83.96
GSMUA_Achr4P18250_001	Banana	mitochondrion	30.96	75.32
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	69.3	71.47
VIT_06s0004g02720.t01	Wine grape	cytosol	67.72	70.03
GSMUA_Achr11P...	Banana	cytosol	51.12	69.29
Solyc11g069530.1.1	Tomato	cytosol	66.53	69.18
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	66.8	68.89
KRH22877	Soybean	plastid	66.8	68.7
PGSC0003DMT400062486	Potato	nucleus	65.88	68.31
Solyc06g075130.2.1	Tomato	nucleus	63.64	68.03
CDY04553	Canola	cytosol	64.95	67.44
CDX71361	Canola	cytosol	64.95	67.26
GSMUA_Achr2P00220_001	Banana	nucleus	60.34	67.16
Bra011959.1-P	Field mustard	cytosol	64.82	67.12
AT2G28320.1	Thale cress	cytosol	63.5	65.4
TraesCS7A01G538600.2	Wheat	cytosol, plastid	31.23	31.43
TraesCS4A01G437200.1	Wheat	plastid	30.04	29.92
TraesCS7A01G050100.1	Wheat	nucleus	29.78	29.7
TraesCS6A01G005000.1	Wheat	nucleus	29.51	29.4
TraesCS7A01G424300.1	Wheat	cytosol	11.86	28.12
TraesCS7A01G303600.1	Wheat	cytosol	10.8	26.54
TraesCS2A01G242800.1	Wheat	cytosol	10.67	26.21
TraesCS5A01G173000.1	Wheat	cytosol	25.82	25.89

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	PFAM:PF00169
PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848
PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	EnsemblPlantsGene:TraesCS1A01G156500	EnsemblPlants:TraesCS1A01G156500.1	TIGR:cd00177	TIGR:cd00821
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:277629409..277640907

Molecular Weight (calculated)

84855.7 Da

IEP (calculated)

7.364

GRAVY (calculated)

-0.373

Length

759 amino acids

Sequence
(BLAST)

001: MGGAEAAVVE AASTAAAAEA AEGGEDGRME GWLYLIRSNR LGLQTSRKRY FVLEDSALRC FKAAPAPSSS SSKREDPVRS AVIDSCIRVT DNGRESVHRS
101: VFYIFTLYNA SNHYDQLKLG ARSSEEAARW IRCLMESALK SPGKDEHVVA CSHRRWQAFR LSRRSNRMHS IDWTILSSSH NDPMASDVIA PSAWTIFGCT
201: NGLRLFTEAK DGGSRGKYWD DHPAIMAVGV VDANSEDIFQ TLMSLGQSRS EWDFCLREGR VVEHLDGHSD IIHKKLRGDW LPWGMRKRDL LLRRYWRREE
301: DGTYVILYHS VFHNRCSPEK GYIRACLKSG GYVISPVSQG RQSVVKHMLA IDWKFWKSYL LTSSAKYITI RMLGRVAALR ELFRAKNGNC ACMEFSSGEL
401: MRDMGLPQGG NEPTKIETQS ANECERLEGP VEGPQGGSKR HLSSTGSLVQ LNDATDEFFD VPDESEYDQR EAMWSSDEST HAADQRHAKL SSAAVFVRKL
501: HDLAVQKRGY IDLQGAADAD NGPCYYGHTL PKDSSCTMPS SWSMTDPTTF LIRGESYLLD RQKIKAENTL MQMVGADWIK SDKREDDLAG RPGGLVQKYA
601: AQGGSKFFFI VNIQVPGSTT YSLALYYMMD TPLEKVPLLE RFVNGDDTFR NSRFKLIPYI SKGSWIVKQS VGKKACLVGQ ALEINYFRGS NYLELGVDIG
701: SSTVARGVVS LVLGYLNNLV IEMAFLVQGN TQEELPEFLL GTCRLNYLDA SKAVSLDEC

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.