Factsheet for Bra011959.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04553	Canola	cytosol	99.45	99.73
CDX71361	Canola	cytosol	99.59	99.59
AT2G28320.1	Thale cress	cytosol	91.54	91.04
Os10t0479800-01	Rice	cytosol	14.19	86.67
VIT_06s0004g02720.t01	Wine grape	cytosol	74.08	73.98
Solyc11g069530.1.1	Tomato	cytosol	72.03	72.33
GSMUA_Achr4P18250_001	Banana	mitochondrion	30.7	72.12
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	69.99	69.7
KRH22877	Soybean	plastid	70.12	69.65
PGSC0003DMT400062486	Potato	nucleus	69.3	69.4
Solyc06g075130.2.1	Tomato	nucleus	66.98	69.15
TraesCS1D01G155000.1	Wheat	nucleus	67.39	65.09
TraesCS1B01G173600.1	Wheat	nucleus	67.26	64.95
TraesCS1A01G156500.1	Wheat	nucleus	67.12	64.82
GSMUA_Achr1P08990_001	Banana	nucleus	60.44	63.56
EER91476	Sorghum	nucleus	66.3	63.53
GSMUA_Achr11P...	Banana	cytosol	47.89	62.68
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	62.76	62.5
Bra014786.1-P	Field mustard	cytosol	61.66	62.34
Bra007098.1-P	Field mustard	cytosol	61.12	62.05
HORVU1Hr1G041740.29	Barley	extracellular, nucleus, plasma membrane	65.48	61.86
Zm00001d032685_P001	Maize	nucleus	63.85	61.02
GSMUA_Achr2P00220_001	Banana	nucleus	54.3	58.36
Bra003193.1-P	Field mustard	cytosol	53.62	40.06
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	13.78	33.33
Bra017600.1-P	Field mustard	mitochondrion, nucleus	31.38	32.03
Bra013371.1-P	Field mustard	mitochondrion	31.38	32.03
Bra036529.1-P	Field mustard	cytosol	12.28	31.58
Bra009809.1-P	Field mustard	cytosol	11.05	28.72
Bra015470.1-P	Field mustard	cytosol	11.87	28.25
Bra009807.1-P	Field mustard	cytosol	11.19	27.99
Bra038938.1-P	Field mustard	nucleus	26.19	24.94
Bra012558.1-P	Field mustard	cytosol	30.7	16.98

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra011959	EnsemblPlants:Bra011959.1	EnsemblPlants:Bra011959.1-P
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008289	GO:GO:0016020	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393
UniProt:M4D651	PFAM:PF00169	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain
PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	SMART:SM00233	SMART:SM00234
SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00025419B5	SEG:seg

Description

AT2G28320 (E=0.0) | pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Coordinates

chrA07:+:10949149..10953303

Molecular Weight (calculated)

82631.5 Da

IEP (calculated)

7.564

GRAVY (calculated)

-0.453

Length

733 amino acids

Sequence
(BLAST)

001: MGENESEAKM EGWLYIIRSN RFGLHFSKKR YFILADHLLK SFKSISDSKT KDGGRSAVID SCIRVTDNGR ESVHRKAFFI FTLYNTSNHN DQLKLGASSP
101: EDAARWINLI KEEALKGSSN PGDVFSCSRS RWDSLRLSSS VREHHSNSID WTLRSSARVD PVTTTDVVAP SPWTIFGCQN GLRLFKEAKE RDSLGRWDDH
201: PAIMAVGVVD GTSENIFQTL LSLGPSRSEW DFCFFQGSVV EHLDGHTDII HKQLYSDWLP WGMKRRDFSL RRYWRREDDG TYVILYHSVF HKKCPPQKGY
301: IRACLKSGGY VISPIDNGKQ SVVKHMLAVD WKSWRSYVKP SLARSITVKM LGRISALREL FRAKHGSFPS SGELSRSARL NQNEESGFGE SSSLTECEMY
401: KDPANEERDK FPSERSSLVD LNDGVDEFFD VPEPSDNDHL DDNWASDFDS DTYSQDTRQP KLNSASSLVR KIHDLAVQKR GYVDLHERAR EESSTPCCYG
501: TTLPTDPTCA LPCSWTTTDS STFLIRGKTY LSDQKKVTAK GTLMQMVAAD WLKSDKREDD LGSRPGGIVQ KYAAKGGPEF FFIVNIQVPG STTYSLVLYY
601: MMSTPIEEHP LLVSFVNGDD AYRNSRFKLI PYISKGSWIV KQSVGKKACL VGQALEINYF RGKNYIELGV DIGSSTVARG VVSLVLGYLN KLVIEMAFLV
701: QANTEEELPE YLLGTCRLNH LDASKSVPVV PQS

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.