Factsheet for GSMUA_Achr4P18250_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0479800-01	Rice	cytosol	33.65	87.5
GSMUA_Achr11P...	Banana	cytosol	72.44	40.36
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	86.86	36.82
GSMUA_Achr1P08990_001	Banana	nucleus	72.44	32.42
Solyc06g075130.2.1	Tomato	nucleus	73.08	32.11
GSMUA_Achr2P00220_001	Banana	nucleus	69.23	31.67
Solyc11g069530.1.1	Tomato	cytosol	74.04	31.64
KRH22877	Soybean	plastid	74.68	31.57
VIT_06s0004g02720.t01	Wine grape	cytosol	74.04	31.47
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	74.04	31.39
TraesCS1D01G155000.1	Wheat	nucleus	75.64	31.09
TraesCS1B01G173600.1	Wheat	nucleus	75.64	31.09
PGSC0003DMT400062486	Potato	nucleus	72.76	31.01
TraesCS1A01G156500.1	Wheat	nucleus	75.32	30.96
CDY04553	Canola	cytosol	72.44	30.92
CDX71361	Canola	cytosol	72.12	30.7
Bra011959.1-P	Field mustard	cytosol	72.12	30.7
EER91476	Sorghum	nucleus	74.68	30.46
HORVU1Hr1G041740.29	Barley	extracellular, nucleus, plasma membrane	75.32	30.28
AT2G28320.1	Thale cress	cytosol	71.47	30.26
Zm00001d032685_P001	Maize	nucleus	67.95	27.64
GSMUA_Achr5P21900_001	Banana	cytosol	29.17	27.49
GSMUA_Achr7P15920_001	Banana	cytosol	27.56	26.22
GSMUA_Achr5P04860_001	Banana	plastid	21.79	24.29
GSMUA_Achr1P11490_001	Banana	plastid	26.6	20.8
GSMUA_Achr4P05670_001	Banana	mitochondrion	36.86	15.82
GSMUA_Achr4P12370_001	Banana	mitochondrion	36.22	15.67
GSMUA_Achr5P17990_001	Banana	mitochondrion	36.54	15.66
GSMUA_Achr11P...	Banana	mitochondrion	36.86	15.17
GSMUA_Achr9P13170_001	Banana	nucleus	32.05	13.32
GSMUA_Achr4P18260_001	Banana	mitochondrion	6.73	4.81

Protein Annotations

EnsemblPlants:GSMUA_Achr4P18250_001	EnsemblPlants:GSMUA_Achr4T18250_001	EnsemblPlantsGene:GSMUA_Achr4G18250_001	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86
PFAM:PF07059	SEG:seg	UniParc:UPI000296DD8D	UniProt:M0SPY8	MapMan:35.1	:

Description

DUF1336 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G18250_001]

Coordinates

chr4:-:18926337..18939623

Molecular Weight (calculated)

34538.8 Da

IEP (calculated)

7.497

GRAVY (calculated)

0.019

Length

312 amino acids

Sequence
(BLAST)

001: MCRGQLMRHV LVNVRTSTFA TDLLLRIILF LGELVQDQRH SKLSTAAVFV RKLHDIAVQK RGYVDLQEAS TGESVPCSYG ATLPKDPCCS LPSSWAMADP
101: STFLIRGESY LHDHLKIKAN GTLMQMVAAD WLKSDKREDD LGGRPGGIVQ KYSAHGGSEF FFIVHIQVPG STTYSLALYY MMDSPLESFP LLERFVKGDD
201: AYRNSRFKLI PYISKGSWIV KQSVGKKACL VGQALDINYF CGSNYIELGV DVGSSTVARG VVSLVLGYLT NLVIEMAFLI QGNTEEELPE FLLGTCRLNH
301: LDASKAVPSN PW

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.