Factsheet for GSMUA_Achr5P17990_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	88.46	84.96
VIT_02s0033g00080.t01	Wine grape	mitochondrion	76.65	78.59
KRG90499	Soybean	extracellular	7.83	78.08
KRH76356	Soybean	mitochondrion	77.61	77.72
KRH39650	Soybean	mitochondrion	77.47	77.69
Bra013371.1-P	Field mustard	mitochondrion	75.0	76.04
CDX78916	Canola	mitochondrion	75.0	76.04
CDX99399	Canola	mitochondrion	74.86	75.91
Solyc12g096050.1.1	Tomato	mitochondrion	75.27	75.69
TraesCS7D01G523200.2	Wheat	plastid	75.27	75.59
CDY01578	Canola	mitochondrion	74.18	75.42
AT5G45560.1	Thale cress	mitochondrion	74.45	75.38
TraesCS7B01G458700.1	Wheat	cytosol, plastid	75.0	75.31
EER94411	Sorghum	cytosol, nucleus, plastid	75.41	75.1
AT4G19040.2	Thale cress	mitochondrion	74.45	74.97
Bra017600.1-P	Field mustard	mitochondrion, nucleus	73.9	74.93
CDY13045	Canola	mitochondrion	73.76	74.79
CDX98603	Canola	mitochondrion	73.76	74.79
CDY23114	Canola	mitochondrion	73.63	74.65
HORVU7Hr1G117780.12	Barley	plastid	75.0	73.49
TraesCS7A01G538600.2	Wheat	cytosol, plastid	75.55	72.94
Solyc08g005410.2.1	Tomato	cytosol	70.33	72.21
VIT_02s0033g00120.t01	Wine grape	cytosol	72.66	72.07
PGSC0003DMT400047520	Potato	cytosol	70.33	71.71
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	13.32	69.29
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	67.45	67.82
GSMUA_Achr4P05670_001	Banana	mitochondrion	66.76	66.85
GSMUA_Achr4P12370_001	Banana	mitochondrion	65.52	66.16
VIT_15s0107g00410.t01	Wine grape	cytosol	49.31	64.68
Bra012558.1-P	Field mustard	cytosol	70.33	38.64
GSMUA_Achr4P18250_001	Banana	mitochondrion	15.66	36.54
GSMUA_Achr5P21900_001	Banana	cytosol	15.93	35.05
GSMUA_Achr7P15920_001	Banana	cytosol	15.25	33.84
GSMUA_Achr11P...	Banana	cytosol	24.86	32.32
GSMUA_Achr5P04860_001	Banana	plastid	12.36	32.14
GSMUA_Achr1P08990_001	Banana	nucleus	30.77	32.14
GSMUA_Achr2P00220_001	Banana	nucleus	28.85	30.79
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	31.04	30.71
GSMUA_Achr4P18260_001	Banana	mitochondrion	17.72	29.52
GSMUA_Achr9P13170_001	Banana	nucleus	28.43	27.56
GSMUA_Achr1P11490_001	Banana	plastid	14.29	26.07

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	EnsemblPlantsGene:GSMUA_Achr5G17990_001	EnsemblPlants:GSMUA_Achr5P17990_001	EnsemblPlants:GSMUA_Achr5T17990_001	InterPro:IPR001849	InterPro:IPR002913
InterPro:IPR011993	InterPro:IPR023393	UniProt:M0SZH8	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf
InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233
SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00029511C6
SEG:seg	:	:	:	:	:

Description

START domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G17990_001]

Coordinates

chr5:-:19207776..19227228

Molecular Weight (calculated)

83238.9 Da

IEP (calculated)

6.689

GRAVY (calculated)

-0.398

Length

728 amino acids

Sequence
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SFIHMRYFVL ETRVLAYYKR KPQDNVVPIK TLLIDGNCRV EDRGLKTHHG HMVYVLCVYN KKEKYHRITM AAFNIQEALI
101: WKEKIELVID QQDSTTATGN KIFSSFPYKS AVDNGRNVSS SDRDSQCSPE EEEEEESHPT LSRRTTIGNG LPDSILDWTR DVDSGLSNDN NSDQVFSRKH
201: WRLVRCQNGL RIFEELVEVD YLPRSCSKAM KAVGIVEATC ESIFQLVMRM DGTRFEWDCS FQYGSLVEEV DGHTAILYHR LQLDWFPVFV WPRDLCYVRY
301: WRRNDDGSYV VLFRSREHVN CSPQPGFVRA HVESGGFKIS PLKPRDGRVR TQVQHLMQID LKGWGVGYLP SFQQHCLIQM LNSVAGLREW FSQTDENHDV
401: SKIPLMVNMT AQTISIKKDR KTQENSVHPN SSLYHMQAAS RHSVILDEDS DEDEDYQIPE PEQEAYPVKL ENDLKKAVLD EEPSESIDLS EFSGNLRHDD
501: RDKSRNCWRI SDGNNFRVRS KHFIYDKTKI PGGRHLMELV AVDWFKDAKR IDHVARRKGC AVQVASEKGL FSLVINVQVP ASTHYSMVFY FVSKPLVPGS
601: LLQLFVDGDD EFRNSRFKLI PAVPKGSWIV RQSVGSTPCL LGKAVDCTYI RGSEYLEIDV DIGSSTVANG VLGIVFGVIT TLVVDMAFLV QANTYDELPE
701: RLIGAVRVSH VELSSAIVPS FEANSPDG

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.