Factsheet for GSMUA_Achr4P12370_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05670_001	Banana	mitochondrion	75.45	74.83
GSMUA_Achr5P17990_001	Banana	mitochondrion	66.16	65.52
GSMUA_Achr11P...	Banana	mitochondrion	65.05	61.87
VIT_15s0107g00440.t01	Wine grape	cytosol	25.66	54.25
Os10t0455900-01	Rice	plasma membrane	22.75	52.06
GSMUA_Achr4P18250_001	Banana	mitochondrion	15.67	36.22
GSMUA_Achr5P21900_001	Banana	cytosol	15.95	34.74
GSMUA_Achr7P15920_001	Banana	cytosol	15.67	34.45
GSMUA_Achr11P...	Banana	cytosol	24.41	31.43
GSMUA_Achr5P04860_001	Banana	plastid	12.21	31.43
GSMUA_Achr1P08990_001	Banana	nucleus	29.82	30.85
GSMUA_Achr2P00220_001	Banana	nucleus	29.13	30.79
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	29.96	29.35
GSMUA_Achr9P13170_001	Banana	nucleus	27.46	26.36
GSMUA_Achr4P18260_001	Banana	mitochondrion	15.95	26.32
GSMUA_Achr1P11490_001	Banana	plastid	14.15	25.56

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	EnsemblPlantsGene:GSMUA_Achr4G12370_001	EnsemblPlants:GSMUA_Achr4P12370_001	EnsemblPlants:GSMUA_Achr4T12370_001	InterPro:IPR001849	InterPro:IPR002913
InterPro:IPR011993	InterPro:IPR023393	UniProt:M0SNA2	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf
InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233
SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00029663BB
SEG:seg	:	:	:	:	:

Description

START domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G12370_001]

Coordinates

chr4:+:9148571..9162556

Molecular Weight (calculated)

82010.3 Da

IEP (calculated)

5.202

GRAVY (calculated)

-0.338

Length

721 amino acids

Sequence
(BLAST)

001: MTKVVYEGWM VRYGRRKIGK SFIHMRYFVL ETRLLAYYKK QPTDNMVPLQ SLVIDGNCRV EDRGLKTQQG HMVYVLCVYN KKEKNQRMMM AAYNIQDALN
101: WKEKIEFVID QQHGLATDNG NSTFVSRDLG MDIERNVSSS SHGRNHQVLG YLCTARTYVL YIGFGFHPED EEENNPNLPW RTTTGNGPPD SVLDWTRLRI
201: FEELPRADHL PRGYSKAMKA VGVVDATCAA IFELIMSMDG TRFEWDCSFQ HGDLVEEVDG HTAVLYQRLQ LEWCSRIVWP RDLCYVRYWR HNDDGSYVVL
301: FQSREHSNCG PQPGFVRAHM ESGGFKISPL KPRNRGPRTQ VQHLMQIDLR GWFVGYFPSF QQHCLLHMLS SVAGIRELFS QTDEVHTAPR IPIMVSMTSD
401: SVSSEKEQKT QEISIQPGVS LDQVFTDNTH PLILDEDSDD EEDTHILDAE EEMELGSYCH VFQKNIEEMD VDTSDSFDTS CFSGNLRWDD DENSRDCWRL
501: PDGNNFKVRS ENFFKDKSKI PAGKYVMELV AVDWLKNATR MDNVARRSGC AAQVSYICDS LGLFSFVINL QIPGSTHYSL VFYYVKKQLE PGSLLQRFVD
601: GDDEFRNSRF KLIPSVTKGS WIVRQSVGST ACLLGKAVDC TYVRGEKYLE IDVDIGSSAV ANGVLGLVFG VLTSLVVDMA FLIQAVSPDE LPERLIGAVR
701: IAHAELSSAV VADLGDDPLE E

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.