Factsheet for GSMUA_Achr11P23530_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P17990_001	Banana	mitochondrion	84.96	88.46
KRG90499	Soybean	extracellular	7.78	80.82
VIT_02s0033g00080.t01	Wine grape	mitochondrion	71.64	76.48
KRH76356	Soybean	mitochondrion	72.43	75.52
KRH39650	Soybean	mitochondrion	72.3	75.48
Bra013371.1-P	Field mustard	mitochondrion	70.84	74.79
CDX78916	Canola	mitochondrion	70.84	74.79
CDX99399	Canola	mitochondrion	70.71	74.65
CDY01578	Canola	mitochondrion	70.05	74.16
Bra017600.1-P	Field mustard	mitochondrion, nucleus	69.92	73.82
CDX98603	Canola	mitochondrion	69.92	73.82
CDY13045	Canola	mitochondrion	69.92	73.82
TraesCS7B01G458700.1	Wheat	cytosol, plastid	70.58	73.79
TraesCS7D01G523200.2	Wheat	plastid	70.58	73.79
Solyc12g096050.1.1	Tomato	mitochondrion	70.45	73.76
AT5G45560.1	Thale cress	mitochondrion	69.92	73.71
CDY23114	Canola	mitochondrion	69.66	73.54
EER94411	Sorghum	cytosol, nucleus, plastid	70.84	73.46
AT4G19040.2	Thale cress	mitochondrion	70.05	73.44
HORVU7Hr1G117780.12	Barley	plastid	70.45	71.87
TraesCS7A01G538600.2	Wheat	cytosol, plastid	70.84	71.22
VIT_02s0033g00120.t01	Wine grape	cytosol	68.34	70.57
Solyc08g005410.2.1	Tomato	cytosol	65.57	70.1
PGSC0003DMT400047520	Potato	cytosol	65.83	69.89
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	12.8	69.29
GSMUA_Achr4P05670_001	Banana	mitochondrion	63.06	65.75
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	62.8	65.75
GSMUA_Achr4P12370_001	Banana	mitochondrion	61.87	65.05
VIT_15s0107g00410.t01	Wine grape	cytosol	46.31	63.24
Bra012558.1-P	Field mustard	cytosol	67.02	38.34
GSMUA_Achr4P18250_001	Banana	mitochondrion	15.17	36.86
GSMUA_Achr5P21900_001	Banana	cytosol	15.3	35.05
GSMUA_Achr7P15920_001	Banana	cytosol	14.78	34.15
GSMUA_Achr11P...	Banana	cytosol	24.27	32.86
GSMUA_Achr5P04860_001	Banana	plastid	12.01	32.5
GSMUA_Achr1P08990_001	Banana	nucleus	29.55	32.14
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	30.21	31.11
GSMUA_Achr2P00220_001	Banana	nucleus	27.97	31.09
GSMUA_Achr4P18260_001	Banana	mitochondrion	16.49	28.6
GSMUA_Achr9P13170_001	Banana	nucleus	27.57	27.83
GSMUA_Achr1P11490_001	Banana	plastid	13.59	25.81

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G23530_001	EnsemblPlants:GSMUA_Achr11P23530_001
EnsemblPlants:GSMUA_Achr11T23530_001	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	UniProt:M0RUT3
PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848
PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	TMHMM:TMhelix	UniParc:UPI000296E37D	SEG:seg	:

Description

START domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G23530_001]

Coordinates

chr11:+:23407177..23423602

Molecular Weight (calculated)

87209.6 Da

IEP (calculated)

6.471

GRAVY (calculated)

-0.295

Length

758 amino acids

Sequence
(BLAST)

001: MSKVVYEGWM VRFGRRKIGR SFIHMRYFVL ETRMLAYYKR KPQDIMLPIK TLLIDGNCRV EDRGLKMHHG HMVYVLRVYN KKEKYHRIMS YIYIYIYIYM
101: YMAAFNIQEA LIWKEKIELV IDQQQDFITA NGNKVYASIP YGPMADDGRN ASSSDRESVT YDISINICKH ENLSDVIISI PEEEEESRPT LSRRITIGNA
201: FPDSVPDWTC DVDSGLLSEN NTDQVFSRKH WRLVRCQNGL RIFEELVEVD YLPRSCSKAM KAVGIMEATC ESIFQLVMRM DGMRFEWDCS FQYGSLVEEV
301: DGHTAILYHR LQLDWFPVFV WPRDLCYVRY WRRNDDGSYV VLFRSREHVN CSPQPGFVRA HVESGGFKIS PLKTCNGRLR TQVQYLMQID LKGWGVGYFP
401: SFQQHCLIQM LNSVAGLREW FSQTDENYDV SKMPLMVNMT AETAPIKKDR KTQENSVQPN SSQYQMHGAS RHHVMLDEDS DDDEDYQIPE PEQEVYPIKL
501: ENEFNKAGLD EEPSASIDLS EFSGNLRRDD LDKSRNCWRI SDGNNFRVRS KQFIYDKTKI PAGKHLMELV AVDWFKDVKR IDHVARRKGC AVQVASEKGL
601: FSLVINVQVP ASTHYSMVFY FVSKPLVPGS LLQLFVDGDD EYRNSRFKLI PAVPKGSWIV RQSVGSTPCL LGKAVDCTYI RGPDYLEIDV DIGSSTVANG
701: VLGLVFGVIT TLVVDMAFLV QANTYEELPE RLIGAVRVSH VELSSALVPV LEASAPNV

Best Arabidopsis Sequence Match ( AT4G19040.2 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPGVHPIKE EPAHNIDLSC FSGNLKRNEN
501: ENARNCWRIS DGNNFKVRGK NFGQEKRKIP AGKHLMDLVA VDWFKDSKRI DHVARRKGCA AQVAAEKGLF SMVVNVQVPG STHYSMVFYF VMKELVPGSL
601: LQRFVDGDDE FRNSRLKLIP LVPKGSWIVR QSVGSTPCLL GKAVDCNYIR GPTYLEIDVD IGSSTVANGV LGLVIGVITS LVVEMAFLVQ ANTAEEQPER
701: LIGAVRVSHI ELSSAIVPNL ESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.