CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01578	Canola	mitochondrion	98.47	98.74
CDX78916	Canola	mitochondrion	95.96	95.96
CDX99399	Canola	mitochondrion	95.82	95.82
AT4G19040.2	Thale cress	mitochondrion	93.73	93.08
CDY13045	Canola	mitochondrion	87.47	87.47
CDY23114	Canola	mitochondrion	87.19	87.19
KRG90499	Soybean	extracellular	8.36	82.19
VIT_02s0033g00080.t01	Wine grape	mitochondrion	79.39	80.28
KRH76356	Soybean	mitochondrion	78.97	77.99
KRH39650	Soybean	mitochondrion	78.83	77.96
Solyc12g096050.1.1	Tomato	mitochondrion	77.86	77.21
VIT_02s0033g00120.t01	Wine grape	cytosol	75.63	73.98
GSMUA_Achr5P17990_001	Banana	mitochondrion	74.79	73.76
Solyc08g005410.2.1	Tomato	cytosol	72.14	73.06
PGSC0003DMT400047520	Potato	cytosol	72.28	72.69
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	14.07	72.14
EER94411	Sorghum	cytosol, nucleus, plastid	72.56	71.27
TraesCS7D01G523200.2	Wheat	plastid	71.31	70.62
TraesCS7B01G458700.1	Wheat	cytosol, plastid	71.03	70.34
GSMUA_Achr11P...	Banana	mitochondrion	73.82	69.92
HORVU7Hr1G117780.12	Barley	plastid	71.17	68.78
TraesCS7A01G538600.2	Wheat	cytosol, plastid	71.45	68.04
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	64.48	63.95
VIT_15s0107g00410.t01	Wine grape	cytosol	48.75	63.06
Os10t0455900-01	Rice	plasma membrane	27.3	62.22
Bra012558.1-P	Field mustard	cytosol	94.01	50.94
CDY41767	Canola	extracellular, golgi	5.29	40.0
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	15.74	37.29
CDX78399	Canola	nucleus, plastid	15.6	36.96
CDY64695	Canola	cytosol, golgi, nucleus	14.62	33.02
CDX88150	Canola	cytosol	12.95	32.98
CDY05382	Canola	cytosol	12.26	32.71
CDX80479	Canola	cytoskeleton, cytosol, nucleus	13.09	32.08
CDY04553	Canola	cytosol	31.62	31.05
CDX71361	Canola	cytosol	31.62	30.97
CDY47711	Canola	cytosol	12.95	30.19
CDX88148	Canola	cytosol	10.86	29.55
CDX67608	Canola	cytosol	29.67	29.5
CDY07523	Canola	cytosol	29.53	29.36
CDX73448	Canola	cytosol	29.25	29.09
CDX78263	Canola	cytosol	29.25	29.09
CDY02892	Canola	cytosol	29.11	28.83
CDX80480	Canola	cytosol	7.94	27.8
CDY58454	Canola	cytosol	28.97	27.15
CDY41766	Canola	nucleus	28.83	26.4
CDY69875	Canola	cytosol	14.76	22.94
CDY10168	Canola	nucleus	13.23	16.84
CDX98605	Canola	cytosol	3.48	5.42
CDY47710	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	GO:A0A078EH01	EnsemblPlants:CDX98603	ProteinID:CDX98603
ProteinID:CDX98603.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	EnsemblPlantsGene:GSBRNA2T00106635001
InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	PFAM:PF00169	PFAM:PF01852
PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136
PANTHER:PTHR12136:SF47	SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf
InterPro:START_lipid-bd_dom	UniParc:UPI0004EDB70F	SEG:seg	:	:	:

Description

BnaA03g43880D

Coordinates

chrLK031906:-:62436..67858

Molecular Weight (calculated)

81572.0 Da

IEP (calculated)

7.106

GRAVY (calculated)

-0.453

Length

718 amino acids

Sequence
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQHSQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKHHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVAFEYKS GMDTGRTASS SDYESHAPED EDDSRRRLVR RTTIGNGPPP SVLDWTKEFD AELANQNSDN QAFSRKHWRL
201: LQCQNGLRIF EELLEVDYLP RSCSRAMKAV GVVEATCEEV FELVMSMDGT RYEWDCSFQY GSLVEEVDGH TAVLYHRLLL DWFPMVVWPR DLCYVRYWRR
301: NDDGSYVVLF RSREHDNCGP QPGCVRAHLE SGGYNIAPLK PRNGRPRTQV QHLIQIDLKG WGAGYLPAFQ QHCLLQMLNS VAGLREWFSQ TDERGVHTRI
401: PVMVNMASSS LGLSKSGRFL HQSAFSVDQT NAANRNSVLM DEDSDDDDEF QIAESEQEGE TSKIETDPVK GSNKEEPAHK IDLSCFSGNL KRNENENARN
501: CWRTSDGNNF KVRSKNFCDD KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVTKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANAPE ELPERLIGAV
701: RVSHIELSSA IVPNLESG

Best Arabidopsis Sequence Match ( AT4G19040.2 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPGVHPIKE EPAHNIDLSC FSGNLKRNEN
501: ENARNCWRIS DGNNFKVRGK NFGQEKRKIP AGKHLMDLVA VDWFKDSKRI DHVARRKGCA AQVAAEKGLF SMVVNVQVPG STHYSMVFYF VMKELVPGSL
601: LQRFVDGDDE FRNSRLKLIP LVPKGSWIVR QSVGSTPCLL GKAVDCNYIR GPTYLEIDVD IGSSTVANGV LGLVIGVITS LVVEMAFLVQ ANTAEEQPER
701: LIGAVRVSHI ELSSAIVPNL ESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.