CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02892	Canola	cytosol	98.92	63.03
CDX73448	Canola	cytosol	90.26	57.76
CDX78263	Canola	cytosol	89.83	57.48
CDY07523	Canola	cytosol	89.61	57.34
CDX67608	Canola	cytosol	89.39	57.2
CDY04553	Canola	cytosol	57.58	36.39
CDX71361	Canola	cytosol	57.36	36.15
KRH08525	Soybean	cytosol	51.3	32.83
CDY64695	Canola	cytosol, golgi, nucleus	11.9	17.3
CDY23114	Canola	mitochondrion	23.38	15.04
CDY13045	Canola	mitochondrion	23.38	15.04
CDX78916	Canola	mitochondrion	22.94	14.76
CDX98603	Canola	mitochondrion	22.94	14.76
CDX99399	Canola	mitochondrion	22.94	14.76
CDY01578	Canola	mitochondrion	22.73	14.66
CDY58454	Canola	cytosol	17.97	10.84
CDY41766	Canola	nucleus	17.97	10.59
CDX80480	Canola	cytosol	1.52	3.41
CDY41767	Canola	extracellular, golgi	0.65	3.16
CDY05382	Canola	cytosol	1.73	2.97
CDX78399	Canola	nucleus, plastid	1.73	2.64
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	1.73	2.64
CDX98605	Canola	cytosol	2.6	2.6
CDX88150	Canola	cytosol	1.52	2.48
CDX88148	Canola	cytosol	1.3	2.27
CDX80479	Canola	cytoskeleton, cytosol, nucleus	1.3	2.05
CDY47711	Canola	cytosol	0.87	1.3
CDY10168	Canola	nucleus	1.08	0.89
CDY47710	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	GO:A0A078JTV7	UniProt:A0A078JTV7	EnsemblPlants:CDY69875
ProteinID:CDY69875	ProteinID:CDY69875.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	EnsemblPlantsGene:GSBRNA2T00093336001
InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	PFAM:PF00169	PFAM:PF01852
InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86
SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI0004EDC344	SEG:seg	:	:	:	:

Description

BnaAnng31850DBnaAnng31850D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JTV7]

Coordinates

chrLK040583:+:875..3681

Molecular Weight (calculated)

53494.5 Da

IEP (calculated)

8.379

GRAVY (calculated)

-0.559

Length

462 amino acids

Sequence
(BLAST)

001: MEMSQIDGRM EGWLYTIRHN RFGLQFSRKR YFVLHDNNLT SFKSVPSDQN EEPDRRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKKFPF PDCEFVSHAE KGLVKFNVSR RSRRKNSVDW TNYSSVNVET IAPDVIAPSP WKIFGCQNGL RLFKEAKDWD SRGRHWDDHP
201: AIMAVGVIDG TSEDIFNTLM SLGPLRSEWD FCFYKGTVVE HLDGHTDIVN IQLYSDWLPW LMNRRDVLLR RYWRREEDGT YVILCHSVYH KKCPPTKGYV
301: RACIKSGGYV VTPVSKGKQS LVKHMVAIDW RSWNLYMRPS SERSITIRVV ERLAALREMF KAKQGHGFAE FVSGEFMQTK SSLSKINTLP FKKEAKRIDL
401: ELVKVEEMEK PSSARNSLMD LNDASDEFFD VPEPNESYEF DSLIDNSPFS QGHSQLKLPS PS

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.