Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038938.1-P | Field mustard | nucleus | 97.32 | 99.09 |
| CDY58454 | Canola | cytosol | 96.05 | 98.3 |
| AT5G35180.4 | Thale cress | cytosol | 89.54 | 86.56 |
| CDY41767 | Canola | extracellular, golgi | 9.44 | 77.89 |
| KRH03545 | Soybean | nucleus | 66.07 | 69.72 |
| KRH20109 | Soybean | cytosol, nucleus | 66.07 | 69.34 |
| Solyc07g005000.2.1 | Tomato | cytosol | 63.14 | 65.74 |
| KRH12970 | Soybean | cytosol | 59.44 | 63.66 |
| Zm00001d032166_P003 | Maize | endoplasmic reticulum, plasma membrane | 29.85 | 63.07 |
| EES13904 | Sorghum | plastid | 60.33 | 61.75 |
| Os08t0439100-01 | Rice | plasma membrane | 57.91 | 59.5 |
| GSMUA_Achr9P13170_001 | Banana | nucleus | 56.89 | 59.39 |
| HORVU5Hr1G053070.9 | Barley | cytosol, nucleus | 56.76 | 58.71 |
| TraesCS5A01G173000.1 | Wheat | cytosol | 56.38 | 58.39 |
| TraesCS5B01G170400.1 | Wheat | cytosol | 55.99 | 57.92 |
| TraesCS5D01G177500.2 | Wheat | cytosol | 56.25 | 57.87 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 13.78 | 35.64 |
| CDX78399 | Canola | nucleus, plastid | 13.65 | 35.31 |
| CDY47711 | Canola | cytosol | 12.88 | 32.79 |
| CDY05382 | Canola | cytosol | 11.22 | 32.71 |
| CDY64695 | Canola | cytosol, golgi, nucleus | 12.76 | 31.45 |
| CDX88150 | Canola | cytosol | 11.22 | 31.21 |
| CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 11.48 | 30.72 |
| CDX88148 | Canola | cytosol | 10.08 | 29.92 |
| CDX99399 | Canola | mitochondrion | 26.66 | 29.11 |
| CDY23114 | Canola | mitochondrion | 26.66 | 29.11 |
| CDX78916 | Canola | mitochondrion | 26.66 | 29.11 |
| CDY13045 | Canola | mitochondrion | 26.53 | 28.97 |
| CDY01578 | Canola | mitochondrion | 26.4 | 28.91 |
| CDX98603 | Canola | mitochondrion | 26.4 | 28.83 |
| CDX80480 | Canola | cytosol | 7.53 | 28.78 |
| CDY04553 | Canola | cytosol | 24.49 | 26.27 |
| CDX71361 | Canola | cytosol | 24.49 | 26.19 |
| CDX67608 | Canola | cytosol | 23.72 | 25.76 |
| CDY07523 | Canola | cytosol | 23.21 | 25.21 |
| CDY02892 | Canola | cytosol | 22.83 | 24.69 |
| CDX73448 | Canola | cytosol | 22.19 | 24.1 |
| CDX78263 | Canola | cytosol | 22.19 | 24.1 |
| CDY69875 | Canola | cytosol | 10.59 | 17.97 |
| CDY10168 | Canola | nucleus | 12.88 | 17.91 |
| CDX98605 | Canola | cytosol | 1.66 | 2.82 |
| CDY47710 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | GO:A0A078HVL3 | UniProt:A0A078HVL3 | EnsemblPlants:CDY41766 | ProteinID:CDY41766 |
| ProteinID:CDY41766.1 | ncoils:Coil | InterPro:EDR2_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| EnsemblPlantsGene:GSBRNA2T00073635001 | InterPro:IPR002913 | InterPro:IPR023393 | PFAM:PF01852 | PFAM:PF07059 | PFscan:PS50848 |
| PANTHER:PTHR12136 | PANTHER:PTHR12136:SF49 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EDB3CF |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g07210DBnaA08g07210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVL3]
Coordinates
chrLK032505:+:237757..245926
Molecular Weight (calculated)
87453.0 Da
IEP (calculated)
7.881
GRAVY (calculated)
-0.449
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSPGSKKVV PGDGSEKNHS GNLGRRGDLN ESGSSSSGGG GGEGGGGGGT FEYFGQVYHL GSNKIGHDYC HLRFLFIRGK YVEMYKRDPH ENPDIKPIRR
101: GVIGPTMMVE ELGRRKVSHG DVYVIRFSNR LDERKKGEIA CATAGEAMKW VEAFDEAKQQ AEYALSRGGS TRTKLSMEAN IDLEGHRPRV RRYAYGLKKL
201: IRIGQGPETL LRQSSTLVND VRGDSFYGGG DNGDAIEAHE WKCVRTINGM LAGNLRLFGR IVVLGVRIFE DVANFKAGRG FLVKAVAVVE ASADAVFEVI
301: SKLDKHQRYE WDTVTGDSEL IDSYEGHYDV IYCVYDPKYL SRWQSKRDFI FSRQWVRGQD GTYTILQFPA VHKKRPPKSG YRRTDITPST WEIRNLKKRS
401: DAEPPSCLVT HMLEIHSKRW CKWKRTSYSK FEKTIPYALL LQVAGLKEYI GANPAFKYEA SSTVVQSKLS DIPSGEYVDE EMEEQFYDAT DSSSDEEESD
501: EDDEEQDKKE IKVKLKNVSW AIASLSLKQP KAPGASYELD TSVDPVDIDP SQIQGSLRKG NGDKDSNCWN SPSGMGFMIR GKTYLKDNAK VMGGQPLLTL
601: VSVDWLKVDK AVDNIALHPK CLVQSEPGKK LPFILVINLQ VPAKPNYCLV MYYAADRPVS ESSSLGKFVN GSDSYRDSRF KLIPSIVQGY WMVKRAVGTK
701: ACLLGKAVTC KYLRKDNFLE IDVDIGSSAV ARSVIGLVLG YVTSLIVDLA ILIEGKEETE LPEYILGTVR LNRIELDSAV SFEE
101: GVIGPTMMVE ELGRRKVSHG DVYVIRFSNR LDERKKGEIA CATAGEAMKW VEAFDEAKQQ AEYALSRGGS TRTKLSMEAN IDLEGHRPRV RRYAYGLKKL
201: IRIGQGPETL LRQSSTLVND VRGDSFYGGG DNGDAIEAHE WKCVRTINGM LAGNLRLFGR IVVLGVRIFE DVANFKAGRG FLVKAVAVVE ASADAVFEVI
301: SKLDKHQRYE WDTVTGDSEL IDSYEGHYDV IYCVYDPKYL SRWQSKRDFI FSRQWVRGQD GTYTILQFPA VHKKRPPKSG YRRTDITPST WEIRNLKKRS
401: DAEPPSCLVT HMLEIHSKRW CKWKRTSYSK FEKTIPYALL LQVAGLKEYI GANPAFKYEA SSTVVQSKLS DIPSGEYVDE EMEEQFYDAT DSSSDEEESD
501: EDDEEQDKKE IKVKLKNVSW AIASLSLKQP KAPGASYELD TSVDPVDIDP SQIQGSLRKG NGDKDSNCWN SPSGMGFMIR GKTYLKDNAK VMGGQPLLTL
601: VSVDWLKVDK AVDNIALHPK CLVQSEPGKK LPFILVINLQ VPAKPNYCLV MYYAADRPVS ESSSLGKFVN GSDSYRDSRF KLIPSIVQGY WMVKRAVGTK
701: ACLLGKAVTC KYLRKDNFLE IDVDIGSSAV ARSVIGLVLG YVTSLIVDLA ILIEGKEETE LPEYILGTVR LNRIELDSAV SFEE
001: MTSPGSKKVV TTDDGSEKKV SGNLGKVSFS GDLNHSGSHS GSHSRSSSSA GGGEGGTFEY FGWVYHLGVN KIGHEYCNLR FLFIRGKYVE MYKRDPHENP
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEE
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEE
Arabidopsis Description
Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.