CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032166_P003	Maize	endoplasmic reticulum, plasma membrane	45.17	93.26
Os08t0439100-01	Rice	plasma membrane	84.46	84.8
TraesCS5A01G173000.1	Wheat	cytosol	83.03	84.02
TraesCS5B01G170400.1	Wheat	cytosol	82.64	83.51
HORVU5Hr1G053070.9	Barley	cytosol, nucleus	82.64	83.51
TraesCS5D01G177500.2	Wheat	cytosol	82.9	83.33
GSMUA_Achr9P13170_001	Banana	nucleus	65.54	66.84
KRH20109	Soybean	cytosol, nucleus	64.49	66.13
KRH03545	Soybean	nucleus	63.71	65.68
Solyc07g005000.2.1	Tomato	cytosol	63.05	64.14
CDY41767	Canola	extracellular, golgi	7.7	62.11
CDY58454	Canola	cytosol	61.23	61.23
Bra038938.1-P	Field mustard	nucleus	61.49	61.17
KRH12970	Soybean	cytosol	58.09	60.79
CDY41766	Canola	nucleus	61.75	60.33
AT5G35180.4	Thale cress	cytosol	62.01	58.57
OQU76985	Sorghum	cytosol, extracellular, nucleus	13.19	31.08
EER94411	Sorghum	cytosol, nucleus, plastid	28.33	29.69
EER89092	Sorghum	nucleus	27.68	28.27
OQU90416	Sorghum	mitochondrion	25.72	27.1
EER91476	Sorghum	nucleus	27.02	27.06
KXG24431	Sorghum	plastid	13.84	26.57
EES06097	Sorghum	cytosol	27.28	26.16

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.1	EntrezGene:8075678	UniProt:C5YLB0	InterPro:EDR2_C	EnsemblPlants:EES13904
ProteinID:EES13904	ProteinID:EES13904.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0008289	GO:GO:0016020	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR023393
PFAM:PF01852	PFAM:PF07059	InterPro:PH_domain	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF49
SMART:SM00233	EnsemblPlantsGene:SORBI_3007G139600	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
unigene:Sbi.7092	UniParc:UPI0001A8795B	RefSeq:XP_002444409.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:56795770..56818088

Molecular Weight (calculated)

85278.1 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.409

Length

766 amino acids

Sequence
(BLAST)

001: MATAAARPPT APPSAAAGDV SEVELSEAGS PDLGSRSSGS GSGGSGRSAA EYSGWVYHLG VNSIGHEYCH LRFLVIRGKT LAMYKRDPHD HPGLEPIRKG
101: AVSHTLMVEE LGRRRVNHGD VYVLRLYNRL NQTKKGEIAC ATPGEARKWI EAFEQAKQQA DYDLMRGVSW NKLQNENEIN LDGHRPRVRR YAQGLGKLVR
201: IGKGPEMLLR QSSDLRDQER VNTNFGGDTG DAFEAHEWRY VRTFNGIRIF EDITNPKGGK GILLKSVGVV GANPDTVFEV VLNLDKHKRY EWDMLTADLE
301: LVETIDGYCD VVYGTYEPKY LNWWKSKKDF VFSRQWFRGQ DGAYTILQTP VGHKKRPSKH GYERTKINPS TWEIRSLNTS GSSSPKCVVT LMLEISPSFW
401: GRWKRKHSSN FDKSIPFALL SQVAGLREYF AANPALTSEF PSTVVKSKAS ETLIIQSEHE DSEPGDEFYD ALARGESFED EDSDDDDDAT SPKAGKVKLK
501: NVSWAIAGLT LKTTKALVET SELVTNSSPV AVDPSHFHST LHRAKSENDQ NSWSAPGGEK FMIRGKTYLA DYTKVVGGDP LLKLLAVDWF KVNERFDSVA
601: LHPKSLVQSE AAKKIPFILV INLQVPAKPN YNLVMYYAAE RPVNKDSLLG RFIDGTDAYR DARFKLIPSI VEGYWMVKRA VGTKACLLGK AVTCNYLRQD
701: NFLEIDVDIG SSSVARSIIG LVLGYVTSIV VDLAILIEAK EEKELPEYIL GTVRLNRVNP DSAVSI

Best Arabidopsis Sequence Match ( AT5G35180.1 )
(BLAST)

001: MTSPGSKKVV TTDDGSEKKV SGNLGKVSFS GDLNHSGSHS GSHSRSSSSA GGGEGGTFEY FGWVYHLGVN KIGHEYCNLR FLFIRGKYVE MYKRDPHENP
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEE

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.