Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20109 | Soybean | cytosol, nucleus | 69.19 | 69.75 |
| KRH03545 | Soybean | nucleus | 68.26 | 69.18 |
| Zm00001d032166_P003 | Maize | endoplasmic reticulum, plasma membrane | 32.27 | 65.5 |
| CDY58454 | Canola | cytosol | 65.74 | 64.62 |
| KRH12970 | Soybean | cytosol | 62.68 | 64.48 |
| CDY41767 | Canola | extracellular, golgi | 8.1 | 64.21 |
| Bra038938.1-P | Field mustard | nucleus | 65.47 | 64.03 |
| CDY41766 | Canola | nucleus | 65.74 | 63.14 |
| EES13904 | Sorghum | plastid | 64.14 | 63.05 |
| GSMUA_Achr9P13170_001 | Banana | nucleus | 61.35 | 61.52 |
| Os08t0439100-01 | Rice | plasma membrane | 62.28 | 61.47 |
| AT5G35180.4 | Thale cress | cytosol | 66.0 | 61.28 |
| TraesCS5A01G173000.1 | Wheat | cytosol | 60.82 | 60.5 |
| TraesCS5B01G170400.1 | Wheat | cytosol | 60.56 | 60.16 |
| HORVU5Hr1G053070.9 | Barley | cytosol, nucleus | 60.56 | 60.16 |
| TraesCS5D01G177500.2 | Wheat | cytosol | 60.82 | 60.1 |
| Solyc08g006590.1.1 | Tomato | cytosol | 13.41 | 36.33 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 13.28 | 31.75 |
| Solyc12g096050.1.1 | Tomato | mitochondrion | 29.48 | 30.66 |
| Solyc08g005410.2.1 | Tomato | cytosol | 28.69 | 30.47 |
| Solyc06g053360.2.1 | Tomato | cytosol | 12.09 | 29.84 |
| Solyc04g025280.2.1 | Tomato | cytosol | 22.71 | 29.28 |
| Solyc06g075130.2.1 | Tomato | nucleus | 26.96 | 28.59 |
| Solyc11g069530.1.1 | Tomato | cytosol | 27.62 | 28.49 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | InterPro:EDR2_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008289 | GO:GO:0016020 | InterPro:IPR002913 | InterPro:IPR023393 |
| UniProt:K4CAX2 | PFAM:PF01852 | PFAM:PF07059 | PFscan:PS50848 | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF49 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:Solyc07g005000.2 | EnsemblPlants:Solyc07g005000.2.1 | UniParc:UPI000276BBBF |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:16771..35135
Molecular Weight (calculated)
84301.6 Da
IEP (calculated)
8.374
GRAVY (calculated)
-0.383
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEIFPKVK SEGGSSESGG SESGADERGG DNDAFEYFGW VYHLGVNTIG HEYCHLRFLY IRGKYMEMYK RDPHENPGTK PIRRGVINHT LMVEEIGRRR
101: VNHGDLYVLR FYNRLDETKR GEIACASPGE VRKWMEAFDR AKQQADYDLS RGQSARDKLK LESEINLAGH RPRVRRYAHG LKQLIRIGQG PEKLLRKSSK
201: LGAKSESDVY FEADGTDVVE AHEWKCVRTL DGVRIFEDMA NKKTGKGVLV KAVGVVEASA DTVFDVLLSL DRHRRYEWDM LTGDVELIES LDGHCDVVYG
301: TLDLRKLSWW QSKRDFVFSR RWFHGQDGTY TILHFPTEYK KRPPKSGYRR IKMIACSWEI SNIGTSSSLK PARCLVTLIL EIRSKAWFKW KNNEFCKFER
401: TLPFGMLSQV AGLKEYIGAN PALTFESSTV VVQSKTSGVS ISSNELEDAM GSDEFYDAIG TDSSSSDEDS GDEVSSKQDK KVKLKNVSWA IASLALKKTS
501: APDTSKELNP NVPSLTLDPS QFHGTMRHAK GEGDSDCWSS PSGSGFMIRG KTYLKDSTKV TGGDPLLKLI AVDWFKVDEC ITNIALHPKC IVQSEAGKKI
601: PFVLIINLQV PAKPNYSLVL YYAADRPVNK DSLLGKFIDG TDSFRDSRFK LIPSIREGYW MVKRAVGTKA CLLGKAVTCK YLRQDNFLEI DVDIGSSSVA
701: RGVIGLVLGY VTSLVVDLAI LVEAKEEAEL PEYILGTVRL NRVKVDSAVP LEG
101: VNHGDLYVLR FYNRLDETKR GEIACASPGE VRKWMEAFDR AKQQADYDLS RGQSARDKLK LESEINLAGH RPRVRRYAHG LKQLIRIGQG PEKLLRKSSK
201: LGAKSESDVY FEADGTDVVE AHEWKCVRTL DGVRIFEDMA NKKTGKGVLV KAVGVVEASA DTVFDVLLSL DRHRRYEWDM LTGDVELIES LDGHCDVVYG
301: TLDLRKLSWW QSKRDFVFSR RWFHGQDGTY TILHFPTEYK KRPPKSGYRR IKMIACSWEI SNIGTSSSLK PARCLVTLIL EIRSKAWFKW KNNEFCKFER
401: TLPFGMLSQV AGLKEYIGAN PALTFESSTV VVQSKTSGVS ISSNELEDAM GSDEFYDAIG TDSSSSDEDS GDEVSSKQDK KVKLKNVSWA IASLALKKTS
501: APDTSKELNP NVPSLTLDPS QFHGTMRHAK GEGDSDCWSS PSGSGFMIRG KTYLKDSTKV TGGDPLLKLI AVDWFKVDEC ITNIALHPKC IVQSEAGKKI
601: PFVLIINLQV PAKPNYSLVL YYAADRPVNK DSLLGKFIDG TDSFRDSRFK LIPSIREGYW MVKRAVGTKA CLLGKAVTCK YLRQDNFLEI DVDIGSSSVA
701: RGVIGLVLGY VTSLVVDLAI LVEAKEEAEL PEYILGTVRL NRVKVDSAVP LEG
001: MTSPGSKKVV TTDDGSEKKV SGNLGKVSFS GDLNHSGSHS GSHSRSSSSA GGGEGGTFEY FGWVYHLGVN KIGHEYCNLR FLFIRGKYVE MYKRDPHENP
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEV
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEV
Arabidopsis Description
Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.