Factsheet for Bra038938.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58454	Canola	cytosol	98.44	98.96
CDY41766	Canola	nucleus	99.09	97.32
AT5G35180.4	Thale cress	cytosol	89.87	85.33
CDY41767	Canola	extracellular, golgi	10.39	84.21
KRH03545	Soybean	nucleus	67.01	69.45
KRH20109	Soybean	cytosol, nucleus	67.01	69.08
Solyc07g005000.2.1	Tomato	cytosol	64.03	65.47
KRH12970	Soybean	cytosol	60.52	63.66
Zm00001d032166_P003	Maize	endoplasmic reticulum, plasma membrane	30.26	62.8
EES13904	Sorghum	plastid	61.17	61.49
GSMUA_Achr9P13170_001	Banana	nucleus	57.79	59.25
Os08t0439100-01	Rice	plasma membrane	58.7	59.24
HORVU5Hr1G053070.9	Barley	cytosol, nucleus	57.53	58.44
TraesCS5A01G173000.1	Wheat	cytosol	57.27	58.26
TraesCS5B01G170400.1	Wheat	cytosol	56.88	57.78
TraesCS5D01G177500.2	Wheat	cytosol	57.14	57.74
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	14.03	35.64
Bra036529.1-P	Field mustard	cytosol	12.86	34.74
Bra015470.1-P	Field mustard	cytosol	12.99	32.47
Bra009809.1-P	Field mustard	cytosol	11.56	31.56
Bra009807.1-P	Field mustard	cytosol	11.82	31.06
Bra013371.1-P	Field mustard	mitochondrion	27.14	29.11
Bra017600.1-P	Field mustard	mitochondrion, nucleus	27.14	29.11
Bra011959.1-P	Field mustard	cytosol	24.94	26.19
Bra014786.1-P	Field mustard	cytosol	22.99	24.41
Bra007098.1-P	Field mustard	cytosol	22.6	24.1
Bra003193.1-P	Field mustard	cytosol	21.56	16.92
Bra012558.1-P	Field mustard	cytosol	26.62	15.47

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra038938	EnsemblPlants:Bra038938.1	EnsemblPlants:Bra038938.1-P	InterPro:EDR2_C
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008289
GO:GO:0016020	InterPro:IPR002913	InterPro:IPR023393	UniProt:M4FCW8	PFAM:PF01852	PFAM:PF07059
PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF49	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI000254655D	SEG:seg	:	:	:	:

Description

AT5G35180 (E=0.0) | phosphoinositide binding

Coordinates

chrA08:-:8382092..8389893

Molecular Weight (calculated)

86052.1 Da

IEP (calculated)

7.523

GRAVY (calculated)

-0.488

Length

770 amino acids

Sequence
(BLAST)

001: MTSPGSKKVV PGDGSEKNHS GNLGRRGDLN ESGSSSSGGG GGEGGGGGTF EYFGQVYHLG SNKIGHDYCH LRFLFIRGKY VEMYKRDPHE NPDIKPIRRG
101: VIGPTMMVEE LGRRKVSHGD VYVIRFSNRL DERKKGEIAC ATAGEAMKWV EAFDEAKQQA EYALSRGGST RTKLSMEANI DLEGHRPRVR RYAYGLKKLI
201: RIGQGPETLL RQSSTLVNDV RGDSFYGGGD NGDAIEAHEW KCVRTINGVR IFEDVANFKA GRGFLVKAVA VVEASADAVF EVISKLDKHQ RYEWDTVTGD
301: SELIDSYEGH YDVIYCVYDP KYLSRWQSKR DFIFSRQWVR GQDGTYTILQ FPAVHKKRPP KSGYRRTDIT PSTWEIRNLK KRSDAEPPSC LVTHMLEIHS
401: KRWCKWKRTS YSKFEKTIPY ALLLQVAGLK EYIGANPAFK YEASSTVVQS KLSDIPSGEY VDEEMEEQFY DATDSSSDEE ESDEDDEEQD KKEIKVKLKN
501: VSWAIASLSL KQPKGASNEL DTSVDPVDID PSQIQGSLRK GNGDKDSNCW NSPSGMGFMI RGKTYLKDNA KVMGGQPLLT LVSVDWLKVD KAVDNIALHP
601: KCLVQSEPGK KLPFILVINL QVPAKPNYCL VMYYAADRPV SESSSLGKFV NGSDSYRDSR FKLIPSIVQG YWMVKRAVGT KACLLGKAVT CKYLRKDNFL
701: EIDVDIGSSA VARSVIGLVL GYVTSLIVDL AILIEGKEET ELPEYILGTV RLNRIELDSA VSFEVRDLTE

Best Arabidopsis Sequence Match ( AT5G35180.2 )
(BLAST)

001: MTSPGSKKVV TTDDGSEKKV SGNLGKVSFS GDLNHSGSHS GSHSRSSSSA GGGEGGTFEY FGWVYHLGVN KIGHEYCNLR FLFIRGKYVE MYKRDPHENP
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEV

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.