Factsheet for Bra017600.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13045	Canola	mitochondrion	99.86	99.86
CDY23114	Canola	mitochondrion	99.58	99.58
AT5G45560.1	Thale cress	mitochondrion	93.18	93.05
Bra013371.1-P	Field mustard	mitochondrion	89.14	89.14
KRG90499	Soybean	extracellular	8.36	82.19
VIT_02s0033g00080.t01	Wine grape	mitochondrion	78.83	79.72
KRH76356	Soybean	mitochondrion	78.27	77.3
KRH39650	Soybean	mitochondrion	77.86	77.0
Solyc12g096050.1.1	Tomato	mitochondrion	77.58	76.93
GSMUA_Achr5P17990_001	Banana	mitochondrion	74.93	73.9
Solyc08g005410.2.1	Tomato	cytosol	72.28	73.2
PGSC0003DMT400047520	Potato	cytosol	72.42	72.83
VIT_02s0033g00120.t01	Wine grape	cytosol	74.23	72.62
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	13.93	71.43
EER94411	Sorghum	cytosol, nucleus, plastid	72.01	70.72
TraesCS7D01G523200.2	Wheat	plastid	71.03	70.34
TraesCS7B01G458700.1	Wheat	cytosol, plastid	70.75	70.07
GSMUA_Achr11P...	Banana	mitochondrion	73.82	69.92
HORVU7Hr1G117780.12	Barley	plastid	70.61	68.24
TraesCS7A01G538600.2	Wheat	cytosol, plastid	71.17	67.77
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	63.37	62.85
Os10t0455900-01	Rice	plasma membrane	27.44	62.54
VIT_15s0107g00410.t01	Wine grape	cytosol	48.19	62.34
Bra012558.1-P	Field mustard	cytosol	83.57	45.28
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	16.16	38.28
Bra036529.1-P	Field mustard	cytosol	14.9	37.54
Bra009809.1-P	Field mustard	cytosol	13.09	33.33
Bra009807.1-P	Field mustard	cytosol	12.95	31.74
Bra011959.1-P	Field mustard	cytosol	32.03	31.38
Bra015470.1-P	Field mustard	cytosol	13.09	30.52
Bra007098.1-P	Field mustard	cytosol	29.39	29.22
Bra014786.1-P	Field mustard	cytosol	29.39	29.1
Bra038938.1-P	Field mustard	nucleus	29.11	27.14
Bra003193.1-P	Field mustard	cytosol	26.46	19.37

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra017600	EnsemblPlants:Bra017600.1	EnsemblPlants:Bra017600.1-P
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913
InterPro:IPR011993	InterPro:IPR023393	UniProt:M4DM68	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf
InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233
SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000254259F
SEG:seg	:	:	:	:	:

Description

AT5G45560 (E=0.0) | pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Coordinates

chrA09:-:16829513..16834779

Molecular Weight (calculated)

81594.1 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.442

Length

718 amino acids

Sequence
(BLAST)

001: MSKIVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDNQLPIK TMVIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIEYVID QHQDSLVPSG QQYVSFEYKP GMDVERTASS SDHESPFSAL EDEDDSRPDL LRRTTIGNGP PESIFDWTKE LGSELSNHNS SNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFKLVMSMD GTRYEWDCSF HNGRLVEEVD GHTAILYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHANC GPQPGFVRAH LESGGFNIAP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVSGLREWF LQTDERSHPI
401: RIPVMVNMAP SSLALSKGGK PQHKSSHSID QTNGAGRNSV LMDEDSDDDD EFQIAESEQE PDTSKPETVA KKTEEEPALD IDLSCFSGNL RHDDNENGRN
501: CWRISDGNNF KIRGQSFCED KRKTPAGKHL MDLVAVDWFK DTTRIDHVAR RKGCAAQVAA EKGLFSLVVN VQVPGSTHYS MVFYFVTKEL VPGSLFQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTPE ELPERLIGAV
701: RVSHIELSSA TVPKLDSD

Best Arabidopsis Sequence Match ( AT5G45560.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDNQLPIK TMVIDGNCRV EDRGLKTHHG HMVYVLSIYN KKEKHHRITM AAFNIQEALM
101: WKEKIECVID QHQDSLVPSG QQYVSFEYKP GMDAGRTASS SDHESPFSAL EDENDSQRDL LRRTTIGNGP PESILDWTKE FDAELSNQSS SNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELVMSMD GTRYEWDCSF HNGRLVEEVD GHTAILYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGFVRAH LESGGFNIAP LKPRNGRPRT QVQHLIQIDL KGWGSGYLPA FQQHCLLQML NSVSGLREWF SQTDDRGQPI
401: RIPVMVNMAS SSLALGKGGK HHHKSSLSID QTNGASRNSV LMDEDSDDDD EFQIPDSEPE PETSKQDQET DAKKTEEPAL NIDLSCFSGN LRHDDNENAR
501: NCWRISDGNN FKVRGKSFCD DKRKIPAGKH LMDLVAVDWF KDTKRMDHVV RRKGCAAQVA AEKGLFSTVV NVQVPGSTHY SMVFYFVTKE LVPGSLFQRF
601: VDGDDEFRNS RLKLIPLVPK GSWIVRQSVG STPCLLGKAV DCNYIRGPTY LEIDVDIGSS TVANGVLGLV IGVITSLVVE MAFLVQANTP EELPERLIGA
701: VRVSHVELSS AIVPNLDSD

Arabidopsis Description

EDR2LProtein ENHANCED DISEASE RESISTANCE 2-like [Source:UniProtKB/Swiss-Prot;Acc:Q8VZF6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.