Factsheet for Bra006077.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78399	Canola	nucleus, plastid	99.34	99.34
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	99.01	99.01
AT5G10750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	92.74	93.05
KRH52302	Soybean	cytosol	70.3	73.7
KRH61636	Soybean	cytosol	68.98	70.37
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	69.31	68.85
KRH15692	Soybean	cytosol	66.34	67.45
Bra036529.1-P	Field mustard	cytosol	60.4	64.21
PGSC0003DMT400067616	Potato	cytosol	59.41	62.07
Solyc08g068880.1.1	Tomato	mitochondrion	62.05	59.68
PGSC0003DMT400038272	Potato	mitochondrion	61.39	59.05
Bra009807.1-P	Field mustard	cytosol	56.11	58.02
GSMUA_Achr5P04860_001	Banana	plastid	53.47	57.86
Bra009809.1-P	Field mustard	cytosol	53.8	57.8
GSMUA_Achr5P21900_001	Banana	cytosol	62.71	57.4
GSMUA_Achr7P15920_001	Banana	cytosol	62.05	57.32
Solyc08g006590.1.1	Tomato	cytosol	52.48	57.19
KRH05337	Soybean	cytosol	50.49	56.46
TraesCS7D01G417100.2	Wheat	cytosol, mitochondrion, nucleus	56.77	53.58
TraesCS7A01G424300.1	Wheat	cytosol	56.44	53.44
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	57.1	53.23
TraesCS7B01G325500.1	Wheat	cytosol	56.44	53.11
OQU76985	Sorghum	cytosol, extracellular, nucleus	56.11	52.31
Zm00001d036506_P001	Maize	extracellular, nucleus, plastid	54.79	50.76
HORVU7Hr1G098100.1	Barley	plastid	56.11	48.02
Bra015470.1-P	Field mustard	cytosol	35.97	35.39
Bra017600.1-P	Field mustard	mitochondrion, nucleus	38.28	16.16
Bra013371.1-P	Field mustard	mitochondrion	37.95	16.02
Bra038938.1-P	Field mustard	nucleus	35.64	14.03
Bra011959.1-P	Field mustard	cytosol	33.33	13.78
Bra007098.1-P	Field mustard	cytosol	30.69	12.88
Bra014786.1-P	Field mustard	cytosol	30.36	12.69
Bra003193.1-P	Field mustard	cytosol	31.35	9.68
Bra012558.1-P	Field mustard	cytosol	37.29	8.53

Protein Annotations

EnsemblPlants:Bra006077.1	EnsemblPlants:Bra006077.1-P	EnsemblPlantsGene:Bra006077	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF88
PFAM:PF07059	UniParc:UPI000253F8A1	UniProt:M4CPD9	MapMan:35.1	:	:

Description

AT5G10750 (E=4e-162) | unknown protein

Coordinates

chrA03:+:1887407..1888318

Molecular Weight (calculated)

33119.2 Da

IEP (calculated)

7.925

GRAVY (calculated)

-0.349

Length

303 amino acids

Sequence
(BLAST)

001: MSPSKQRHHR SSTGDTKSKP LRSASSSATP EWIAEAINGG SLRRVDPETG TDGWASPPGD VFSLRSDSYL TKKQKSPAGD YLLSPAGMDW LKSTSKLENV
101: LARPDNRVAH ALRKAQSRGQ SLKSFIFAVN LQIPGKDHHS AVFYFAAEEP IPSGSLLHRF VNGDDSFRNQ RFKIVNRIVK GPWVVKAAVG NYGACLLGKA
201: LTCNYHRGDN YFEIDVDICS SAIATAILRL ALGYVTSVTI DMGFLAEAQT EEELPERLIG AVRVCQMEMS SAFVVDAPPP QQLASQPCRT LSLAKVNHDE
301: DED

Best Arabidopsis Sequence Match ( AT5G10750.1 )
(BLAST)

001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED

Arabidopsis Description

At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.