Factsheet for Bra009809.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88150	Canola	cytosol	99.65	99.65
Bra009807.1-P	Field mustard	cytosol	81.91	78.84
Bra036529.1-P	Field mustard	cytosol	71.63	70.88
AT5G25010.1	Thale cress	cytosol	58.87	58.04
AT5G24990.1	Thale cress	cytosol	59.93	57.48
AT5G25020.1	Thale cress	cytosol	54.26	56.88
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	57.8	53.8
KRH52302	Soybean	cytosol	51.77	50.52
KRH61636	Soybean	cytosol	52.84	50.17
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	53.9	49.84
KRH15692	Soybean	cytosol	52.13	49.33
PGSC0003DMT400067616	Potato	cytosol	46.81	45.52
GSMUA_Achr5P04860_001	Banana	plastid	42.55	42.86
KRH05337	Soybean	cytosol	41.13	42.8
Solyc08g006590.1.1	Tomato	cytosol	41.13	41.73
PGSC0003DMT400038272	Potato	mitochondrion	46.45	41.59
Solyc08g068880.1.1	Tomato	mitochondrion	46.1	41.27
GSMUA_Achr7P15920_001	Banana	cytosol	46.1	39.63
GSMUA_Achr5P21900_001	Banana	cytosol	46.45	39.58
TraesCS7A01G424300.1	Wheat	cytosol	43.26	38.12
TraesCS7B01G325500.1	Wheat	cytosol	43.26	37.89
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	43.62	37.85
TraesCS7D01G417100.2	Wheat	cytosol, mitochondrion, nucleus	42.91	37.69
OQU76985	Sorghum	cytosol, extracellular, nucleus	42.91	37.23
Zm00001d036506_P001	Maize	extracellular, nucleus, plastid	41.13	35.47
HORVU7Hr1G098100.1	Barley	plastid	43.62	34.75
Bra015470.1-P	Field mustard	cytosol	34.04	31.17
Bra017600.1-P	Field mustard	mitochondrion, nucleus	33.33	13.09
Bra013371.1-P	Field mustard	mitochondrion	33.33	13.09
Bra038938.1-P	Field mustard	nucleus	31.56	11.56
Bra011959.1-P	Field mustard	cytosol	28.72	11.05
Bra007098.1-P	Field mustard	cytosol	28.01	10.94
Bra014786.1-P	Field mustard	cytosol	26.95	10.48
Bra003193.1-P	Field mustard	cytosol	28.01	8.05
Bra012558.1-P	Field mustard	cytosol	32.98	7.02

Protein Annotations

EnsemblPlants:Bra009809.1	EnsemblPlants:Bra009809.1-P	EnsemblPlantsGene:Bra009809	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF88
PFAM:PF07059	UniParc:UPI000253F2CF	UniProt:M4D012	MapMan:35.1	:	:

Description

AT5G10750 (E=2e-096) | unknown protein

Coordinates

chrA06:-:17413403..17414251

Molecular Weight (calculated)

31496.7 Da

IEP (calculated)

8.742

GRAVY (calculated)

-0.215

Length

282 amino acids

Sequence
(BLAST)

001: MKSPVDHSSP KPAIPEWITE TTNGGTARQV DLYTGINGWA SPPGDGFSVR SADYFTNKQK CPGGDYLLSL AGVDWLKSTT KLDNILARPD NRVAHALRKA
101: QSLGRSQNGF IFAVNFHIPV KEHYHSVLYF VTEEPIPSES LLKQFIDGDD SYRNQRFKIV SQVLRGPWIV KAAAGQFGAF LVAKTVRCTY HKGPNYFEID
201: IDTGSWRILA ALVRLLFGYA RSLILDIGFV VEAQEVDELP ERLIGAVRLC HMDVTSAFVV DPQPLKPYRM MGSLEAKPPR RD

Best Arabidopsis Sequence Match ( AT5G10750.1 )
(BLAST)

001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED

Arabidopsis Description

At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.