Factsheet for Bra013371.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78916	Canola	mitochondrion	100.0	100.0
CDX99399	Canola	mitochondrion	99.58	99.58
AT4G19040.2	Thale cress	mitochondrion	95.26	94.61
Bra017600.1-P	Field mustard	mitochondrion, nucleus	89.14	89.14
KRG90499	Soybean	extracellular	8.36	82.19
VIT_02s0033g00080.t01	Wine grape	mitochondrion	80.08	80.99
KRH76356	Soybean	mitochondrion	80.64	79.64
KRH39650	Soybean	mitochondrion	80.5	79.61
Solyc12g096050.1.1	Tomato	mitochondrion	78.83	78.18
GSMUA_Achr5P17990_001	Banana	mitochondrion	76.04	75.0
VIT_02s0033g00120.t01	Wine grape	cytosol	76.32	74.66
Solyc08g005410.2.1	Tomato	cytosol	72.98	73.91
PGSC0003DMT400047520	Potato	cytosol	73.12	73.53
EER94411	Sorghum	cytosol, nucleus, plastid	73.54	72.23
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	14.07	72.14
TraesCS7D01G523200.2	Wheat	plastid	72.42	71.72
TraesCS7B01G458700.1	Wheat	cytosol, plastid	72.14	71.45
GSMUA_Achr11P...	Banana	mitochondrion	74.79	70.84
HORVU7Hr1G117780.12	Barley	plastid	72.01	69.58
TraesCS7A01G538600.2	Wheat	cytosol, plastid	72.56	69.1
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	65.6	65.06
VIT_15s0107g00410.t01	Wine grape	cytosol	49.72	64.32
Os10t0455900-01	Rice	plasma membrane	27.86	63.49
Bra012558.1-P	Field mustard	cytosol	91.78	49.74
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	16.02	37.95
Bra036529.1-P	Field mustard	cytosol	14.9	37.54
Bra009809.1-P	Field mustard	cytosol	13.09	33.33
Bra009807.1-P	Field mustard	cytosol	13.23	32.42
Bra011959.1-P	Field mustard	cytosol	32.03	31.38
Bra015470.1-P	Field mustard	cytosol	13.23	30.84
Bra007098.1-P	Field mustard	cytosol	29.39	29.22
Bra014786.1-P	Field mustard	cytosol	28.83	28.55
Bra038938.1-P	Field mustard	nucleus	29.11	27.14
Bra003193.1-P	Field mustard	cytosol	26.88	19.67

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra013371	EnsemblPlants:Bra013371.1	EnsemblPlants:Bra013371.1-P
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913
InterPro:IPR011993	InterPro:IPR023393	UniProt:M4DA61	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf
InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233
SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0002546452
SEG:seg	:	:	:	:	:

Description

AT4G19040 (E=0.0) EDR2 | EDR2; lipid binding

Coordinates

chrA01:-:5251347..5256784

Molecular Weight (calculated)

81696.9 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.480

Length

718 amino acids

Sequence
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKHHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDSGRTASS SDHESQFSAP EDEDGSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EVFELVMSMD GTRYEWDCSF QYGSLVEEVD GHTAVLYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHDNC GPQPGCVRAH LESGGYNIAP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLSKSGR SVHQSAFSID QTNSANRNSV LLDEDSDDDD EFQIAESEQE PETSKTETDV KKTEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRTSDGNNF KVRSKSFCDD KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVTKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPQVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTPE ELPERLIGAV
701: RVSHIELSSA IVPNLESD

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.