Factsheet for Bra015470.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G06050.1	Thale cress	cytosol	86.69	85.3
PGSC0003DMT400042135	Potato	cytosol	62.01	60.44
TraesCS7D01G299000.1	Wheat	cytosol	60.06	59.87
TraesCS7B01G203900.1	Wheat	cytosol	60.06	59.87
TraesCS7A01G303600.1	Wheat	cytosol	59.74	59.55
TraesCS2A01G242800.1	Wheat	cytosol	58.12	57.93
HORVU7Hr1G072050.4	Barley	cytosol	59.42	57.91
KRH24608	Soybean	cytosol	58.12	57.74
KRH23216	Soybean	cytosol	41.23	57.47
Solyc06g053360.2.1	Tomato	cytosol	54.87	55.41
VIT_05s0102g00770.t01	Wine grape	cytosol	62.99	53.89
KRH10121	Soybean	endoplasmic reticulum, golgi	61.04	53.56
KRH29613	Soybean	cytosol	49.35	51.35
CDY10168	Canola	nucleus	91.88	50.18
Os08t0152600-01	Rice	cytosol	58.12	49.58
KXG24431	Sorghum	plastid	62.01	47.87
GSMUA_Achr1P11490_001	Banana	plastid	59.42	45.86
Zm00001d024605_P001	Maize	mitochondrion	61.04	43.32
Bra036529.1-P	Field mustard	cytosol	33.77	36.49
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	35.39	35.97
Bra009809.1-P	Field mustard	cytosol	31.17	34.04
Bra009807.1-P	Field mustard	cytosol	29.87	31.4
Bra013371.1-P	Field mustard	mitochondrion	30.84	13.23
Bra017600.1-P	Field mustard	mitochondrion, nucleus	30.52	13.09
Bra038938.1-P	Field mustard	nucleus	32.47	12.99
Bra011959.1-P	Field mustard	cytosol	28.25	11.87
Bra007098.1-P	Field mustard	cytosol	26.62	11.36
Bra014786.1-P	Field mustard	cytosol	25.32	10.76
Bra003193.1-P	Field mustard	cytosol	26.95	8.46
Bra012558.1-P	Field mustard	cytosol	30.52	7.09

Protein Annotations

EnsemblPlants:Bra015470.1	EnsemblPlants:Bra015470.1-P	EnsemblPlantsGene:Bra015470	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61
PFAM:PF07059	SEG:seg	UniParc:UPI0002545312	UniProt:M4DG47	MapMan:35.1	:

Description

AT1G06050 (E=4e-141) | unknown protein

Coordinates

chrA10:+:1586732..1587658

Molecular Weight (calculated)

34063.5 Da

IEP (calculated)

5.837

GRAVY (calculated)

-0.234

Length

308 amino acids

Sequence
(BLAST)

001: MAASSGVETE PEWIKRVKSE GAVPCLKLDS KDCKNSWTTP SPNTFMVRGP HYFSDKVKVP AGDFLLKPLG FDWVKGPTKL SEILSYPSSR IRKAIDEQFQ
101: TEDATAKPFV WAFNLQLPHK DNYSAVAYFV STEPILQGSL MDQFLKGDDG FKKSRLKLIA NIVKGPWIVR KAVGEQAICV IGRALSCKYV SGENFVEIDV
201: DIGSSMVASA IVHLAFGYIT TLTVDLAFLI ESQTDAELPE KLLGAVRFSE LQTDSAVSME LSSSTSNERS SWWKSLGNGF SNLLNQDTPN MNNTSFGNLQ
301: RDEDVKKP

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.