Factsheet for Bra014786.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64695	Canola	cytosol, golgi, nucleus	43.86	100.0
Bra007098.1-P	Field mustard	cytosol	90.48	90.86
AT3G54800.1	Thale cress	cytosol	88.97	87.99
Bra011959.1-P	Field mustard	cytosol	62.34	61.66
Solyc04g025280.2.1	Tomato	cytosol	49.52	61.47
Bra003193.1-P	Field mustard	cytosol	76.97	56.88
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	12.69	30.36
Bra017600.1-P	Field mustard	mitochondrion, nucleus	29.1	29.39
Bra013371.1-P	Field mustard	mitochondrion	28.55	28.83
Bra036529.1-P	Field mustard	cytosol	11.31	28.77
Bra009809.1-P	Field mustard	cytosol	10.48	26.95
Bra015470.1-P	Field mustard	cytosol	10.76	25.32
Bra009807.1-P	Field mustard	cytosol	10.07	24.91
Bra038938.1-P	Field mustard	nucleus	24.41	22.99
Bra012558.1-P	Field mustard	cytosol	28.14	15.4

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra014786	EnsemblPlants:Bra014786.1	EnsemblPlants:Bra014786.1-P
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913
InterPro:IPR011993	InterPro:IPR023393	UniProt:M4DE67	PFAM:PF00169	PFAM:PF01852	PFAM:PF07059
InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86
SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI0002544CFF	SEG:seg	:	:	:	:

Description

AT3G54800 (E=1e-291) | pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Coordinates

chrA04:-:3143395..3147174

Molecular Weight (calculated)

82667.8 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.407

Length

725 amino acids

Sequence
(BLAST)

001: MEMSQIDGRM EGWLYTIRHN RFGLQFSRKR YFVLHDNNLT SFKSVPSDQN EEPDRRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKKFPF PDCEFVSHAE KGLVKFNVSR RSRRKNSVDW TNYSSVNVET IAPDVIAPSP WKIFGCQNGL RLFKEAKDWD SRGRHWDDHP
201: AIMAVGVIDG TSEDIFNTLM SLGPLRSEWD FCFYKGTVVE HLDGHTDIVN IQLYSDWLPW LMNRRDVLLR RYWRREEDGT YVILCHSVYH KKCPPTKGYV
301: RACVKSGGYV VTPVSKGKQS LVKHMVAIDW RSWNLYMRPS SERSITIRVV ERLAALREMF KAKQGHGFAE FVSGEFMQTK SSLSKINTLP FKKEAKRIDL
401: ELVKVEEMEK PSSARNSLMD LNDASDEFFD VPEPNESYEF DSLIDNSPFS QGHSQLKLPS PSGIVKKLQD LANNKKGYMD LQEVGMDVNS TFIYGATLQQ
501: DPNLTMPCSW SIADPSTFLI RGDNYLNDQQ KVKANGTMMQ MVGADWISSD KREDDLGGRL GGLVQEFAAK GGPEFFFIVN MQVPGSAMIS LALYYMLKTP
601: LEEHPLLHSF VNGDDAYRNS RFKLIPHISK GSWIVKQSVG KKACLVGHAL EVRYTRGKNY LELDIDVGSS TVARGVTNLV LGYLNNLVIE MAFLIQANTA
701: EELPELLLGT CRLNYLDVSK SLKER

Best Arabidopsis Sequence Match ( AT3G54800.1 )
(BLAST)

001: MGVSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLHENNLT SFKSVPSDHN EEPERRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKGFPI PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS STSLNVETNV APDVIAPSPW KIFGCQNGLR LFKEAKDWDS
201: RGRHWDDHPA IMAVGVIDGT SEDIFNTLMS LGPLRSEWDF CFYKGNVVEH LDGHTDIIHL QLYSDWLPWG MNRRDLLLRR YWRREDDGTY VILCHSVYHK
301: NCPPKKGYVR ACVKSGGYVV TPANNGKQSL VKHMVAIDWR SWNLYMRPSS ARSITIRVVE RVAALREMFK AKQGHGFTEF VSGEFLDTKP CLSKINTMPL
401: KTEAKEVDLE TMHAEEMDKP TSARNSLMDL NDASDEFFDV PEPNESTEFD SFIDSSPYSQ GHQLKIPTPA GIVKKLQDLA INKKGYMDLQ EVGLEENNTF
501: FYGATLQKDP SLTLPCSWST ADPSTFLIRG NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ VPGSAMYSLA
601: LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK ACLVGQVLEV CYTRGKNYLE LDIDVGSSTV ARGVTNLVLG YLNNLVIEMA
701: FLIQANTVEE LPELLLGTCR LNYLDVSKSV KER

Arabidopsis Description

AT3G54800 protein [Source:UniProtKB/TrEMBL;Acc:B9DGX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.