Factsheet for Bra003193.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67608	Canola	cytosol	63.4	86.15
Bra007098.1-P	Field mustard	cytosol	56.78	77.15
Bra014786.1-P	Field mustard	cytosol	56.88	76.97
AT3G54800.1	Thale cress	cytosol	56.37	75.44
Solyc04g025280.2.1	Tomato	cytosol	34.56	58.05
Bra011959.1-P	Field mustard	cytosol	40.06	53.62
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	9.68	31.35
Bra036529.1-P	Field mustard	cytosol	9.07	31.23
Bra009809.1-P	Field mustard	cytosol	8.05	28.01
Bra015470.1-P	Field mustard	cytosol	8.46	26.95
Bra013371.1-P	Field mustard	mitochondrion	19.67	26.88
Bra009807.1-P	Field mustard	cytosol	7.95	26.62
Bra017600.1-P	Field mustard	mitochondrion, nucleus	19.37	26.46
Bra038938.1-P	Field mustard	nucleus	16.92	21.56
Bra012558.1-P	Field mustard	cytosol	19.98	14.79

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra003193	EnsemblPlants:Bra003193.1	EnsemblPlants:Bra003193.1-P	ncoils:Coil
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:GTD-bd	InterPro:IPR002913
InterPro:IPR007656	InterPro:IPR023393	UniProt:M4CG60	PFAM:PF01852	PFAM:PF04576	PFAM:PF07059
PFscan:PS50848	PFscan:PS51775	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	SUPFAM:SSF55961	InterPro:START-like_dom_sf
InterPro:START_lipid-bd_dom	UniParc:UPI000254143E	SEG:seg	:	:	:

Description

AT3G54800 (E=3e-206) | pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Coordinates

chrA07:+:11775366..11781631

Molecular Weight (calculated)

111070.0 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.438

Length

981 amino acids

Sequence
(BLAST)

001: MDSEQSFPPR DVVKCCDSVC DYSLGACTKT VKRKFNEEGN LMLLLSRGSS DSSSTAKLLV ENQCAALLED LSSQRKIVKD LHLELEEERN AAASAANETM
101: SMILRLQREK AEIQMEARQF KGFAEEKMTH DQEKLKVLEE LLYEKDQAIE ALSYEVEAYK DSLLSCGITE AEMQDQVLGF EAYPCEYTLK CSVDDENPSG
201: PDGDVEVVEK VMVGQSPRWP YYDPNSPLEA AKEIKGTFSA DSPMSCSSDR VYTIDSVHVG VSEVKIDNEP SKISKEKLKG DHWNSPRYQE PVVMTQHGVN
301: EPDIEKLYTR LQALEADRES LRHTIVSMRT DKAQLVLLKE IAQHLSKETV TTKRRNLVSK MPSFKAFCVV TVFKEPDRRA SLDCCIRVTD NGRESFHRKG
401: FPFPDCEFVS HAEKGLVKLD LSKRTRRKVS VDWTNYSSLN VETIALDVIA PSPWKIFGCQ NGLRLFKEAK DWDSRGKHWD DHPAVMAVGV IDGTSEDIFN
501: TLMSLDPLRS EWDFCFYKGS VVEHLDGHTD IINVQLYSDW LPWGMNRRDL LLRRYWRREE DGTYGGGYVV TPVSKGKQSL VKHMVAIDWR SWNLYMRPSS
601: SRSITIRVVE RLAALREMFK AKQGQGFAEF VSGEFLETKP CLSKVNIRPL ITEAKRVDLE LVKADEMEKP SSARHSLMDL NDVSDEFFDV PEPSEFDSLI
701: DNSPFSQGHS QLKIPSPAGI VKKLQDLANN KKGYMDLQEV GMDDKSTFFY GATLQKDPNF TMPCSWATAD PSTFLIRGEN YLKDRQKVKA NDTLMQMIGA
801: DWISSDKRED NLGGRIGGLV QEYAAKDGPE FFFIVNMQVP GSAMYSLALY YMLKTPLEEH PLLESFVNGD DAYRNSRFKL IPHISKGSWI VKQSVGKKAC
901: LVGQALEVRY TRGKNYLELD VDVGSSTVAR GVTNLVLGYL TNLVIEMAFL IQANTENELP ELLLGTCRLN YLDVSKSVQE R

Best Arabidopsis Sequence Match ( AT3G54800.1 )
(BLAST)

001: MGVSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLHENNLT SFKSVPSDHN EEPERRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKGFPI PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS STSLNVETNV APDVIAPSPW KIFGCQNGLR LFKEAKDWDS
201: RGRHWDDHPA IMAVGVIDGT SEDIFNTLMS LGPLRSEWDF CFYKGNVVEH LDGHTDIIHL QLYSDWLPWG MNRRDLLLRR YWRREDDGTY VILCHSVYHK
301: NCPPKKGYVR ACVKSGGYVV TPANNGKQSL VKHMVAIDWR SWNLYMRPSS ARSITIRVVE RVAALREMFK AKQGHGFTEF VSGEFLDTKP CLSKINTMPL
401: KTEAKEVDLE TMHAEEMDKP TSARNSLMDL NDASDEFFDV PEPNESTEFD SFIDSSPYSQ GHQLKIPTPA GIVKKLQDLA INKKGYMDLQ EVGLEENNTF
501: FYGATLQKDP SLTLPCSWST ADPSTFLIRG NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ VPGSAMYSLA
601: LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK ACLVGQVLEV CYTRGKNYLE LDIDVGSSTV ARGVTNLVLG YLNNLVIEMA
701: FLIQANTVEE LPELLLGTCR LNYLDVSKSV KER

Arabidopsis Description

AT3G54800 protein [Source:UniProtKB/TrEMBL;Acc:B9DGX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.