Factsheet for Bra007098.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78263	Canola	cytosol	99.72	99.72
CDX73448	Canola	cytosol	98.89	98.89
Bra014786.1-P	Field mustard	cytosol	90.86	90.48
AT3G54800.1	Thale cress	cytosol	89.2	87.86
Bra011959.1-P	Field mustard	cytosol	62.05	61.12
Solyc04g025280.2.1	Tomato	cytosol	49.03	60.62
Bra003193.1-P	Field mustard	cytosol	77.15	56.78
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	12.88	30.69
Bra036529.1-P	Field mustard	cytosol	11.63	29.47
Bra013371.1-P	Field mustard	mitochondrion	29.22	29.39
Bra017600.1-P	Field mustard	mitochondrion, nucleus	29.22	29.39
Bra009809.1-P	Field mustard	cytosol	10.94	28.01
Bra015470.1-P	Field mustard	cytosol	11.36	26.62
Bra009807.1-P	Field mustard	cytosol	10.39	25.6
Bra038938.1-P	Field mustard	nucleus	24.1	22.6
Bra012558.1-P	Field mustard	cytosol	28.81	15.7

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EnsemblPlantsGene:Bra007098	EnsemblPlants:Bra007098.1	EnsemblPlants:Bra007098.1-P
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913
InterPro:IPR011993	InterPro:IPR023393	UniProt:M4CSA6	PFAM:PF00169	PFAM:PF01852	PFAM:PF07059
InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86
SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI0002542937	SEG:seg	:	:	:	:

Description

AT3G54800 (E=4e-296) | pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Coordinates

chrA09:+:27297193..27301506

Molecular Weight (calculated)

82008.9 Da

IEP (calculated)

8.189

GRAVY (calculated)

-0.395

Length

722 amino acids

Sequence
(BLAST)

001: MEMSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLLDDNLK SFRSVPSDQN EEPYRRASLD CCIRVTDNGR ESFNRKVLFI FTLYNTTNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKKFPF PDCEFVSHAE KGLVKFNVSR RSRRKNSVDW TNYSSLNVET IAPDVIAPSP WKIFGCQNGL RLFKEAKDWD SRGRHWDDHP
201: AIMAVGVIDG TSENIFNTLM SFGPLRSEWD FSFYKGSVVE HLDGHTDIIN VQLYSDWLPW GMNRRDLLLR RYWRREEDGT YVILCHSVYH KDCPPKKGYV
301: RACVKSGGYV VTPVNKAKQS LVKHMVAIDW RSWNLYTGAS SSRSITIRVV ERLAALREMF KAKQGHGFTE FVSGEFMDTK SCVSNINTGP LKIAAKRVDL
401: ELVKAEDMEK PSSARNSLMD LNDASDEFFD VPEPSEFDSF IDNSPISQGH SQLKIPSPAG IVKKLQDLAI NKKGYMDLQE VGMDEKTTFF YGATLQKDPN
501: LTLPCSWATA DPSTFLIRGE NYLQDQQKVK AKDTMMQMIG ADWISSDKRE DDLGGRLGGV VQEFAAKGGP EFFFIVNMQA PGSAMYSLAL YYMLKTPLED
601: HPLLHSFVNG DDAYRNSRFK LIPHISKGSW IVKQSVGKKA CLVGQALVVR YTRGKNYLEL DIDVGSSTVA RGVTNLVLGY LNNLVIEMAF LIQANTVEEL
701: PELLLGTCRL NYLDASKSVK ER

Best Arabidopsis Sequence Match ( AT3G54800.1 )
(BLAST)

001: MGVSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLHENNLT SFKSVPSDHN EEPERRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKGFPI PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS STSLNVETNV APDVIAPSPW KIFGCQNGLR LFKEAKDWDS
201: RGRHWDDHPA IMAVGVIDGT SEDIFNTLMS LGPLRSEWDF CFYKGNVVEH LDGHTDIIHL QLYSDWLPWG MNRRDLLLRR YWRREDDGTY VILCHSVYHK
301: NCPPKKGYVR ACVKSGGYVV TPANNGKQSL VKHMVAIDWR SWNLYMRPSS ARSITIRVVE RVAALREMFK AKQGHGFTEF VSGEFLDTKP CLSKINTMPL
401: KTEAKEVDLE TMHAEEMDKP TSARNSLMDL NDASDEFFDV PEPNESTEFD SFIDSSPYSQ GHQLKIPTPA GIVKKLQDLA INKKGYMDLQ EVGLEENNTF
501: FYGATLQKDP SLTLPCSWST ADPSTFLIRG NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ VPGSAMYSLA
601: LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK ACLVGQVLEV CYTRGKNYLE LDIDVGSSTV ARGVTNLVLG YLNNLVIEMA
701: FLIQANTVEE LPELLLGTCR LNYLDVSKSV KER

Arabidopsis Description

AT3G54800 protein [Source:UniProtKB/TrEMBL;Acc:B9DGX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.