Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007098.1-P | Field mustard | cytosol | 99.72 | 99.72 |
| CDX73448 | Canola | cytosol | 98.89 | 98.89 |
| CDY64695 | Canola | cytosol, golgi, nucleus | 39.75 | 90.25 |
| CDY02892 | Canola | cytosol | 90.58 | 90.21 |
| CDY07523 | Canola | cytosol | 89.89 | 89.89 |
| CDY69875 | Canola | cytosol | 57.48 | 89.83 |
| CDX67608 | Canola | cytosol | 89.75 | 89.75 |
| AT3G54800.1 | Thale cress | cytosol | 89.06 | 87.72 |
| CDY04553 | Canola | cytosol | 62.47 | 61.7 |
| CDX71361 | Canola | cytosol | 62.33 | 61.39 |
| Solyc04g025280.2.1 | Tomato | cytosol | 49.03 | 60.62 |
| CDY41767 | Canola | extracellular, golgi | 4.85 | 36.84 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 13.16 | 31.35 |
| CDX78399 | Canola | nucleus, plastid | 13.02 | 31.02 |
| CDX99399 | Canola | mitochondrion | 29.22 | 29.39 |
| CDY01578 | Canola | mitochondrion | 29.09 | 29.33 |
| CDY13045 | Canola | mitochondrion | 29.09 | 29.25 |
| CDX78916 | Canola | mitochondrion | 29.09 | 29.25 |
| CDY23114 | Canola | mitochondrion | 29.09 | 29.25 |
| CDX98603 | Canola | mitochondrion | 29.09 | 29.25 |
| CDX88150 | Canola | cytosol | 11.08 | 28.37 |
| CDY05382 | Canola | cytosol | 10.11 | 27.14 |
| CDY47711 | Canola | cytosol | 11.5 | 26.95 |
| CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 10.11 | 24.91 |
| CDX80480 | Canola | cytosol | 7.06 | 24.88 |
| CDX88148 | Canola | cytosol | 9.0 | 24.62 |
| CDY58454 | Canola | cytosol | 24.1 | 22.72 |
| CDY41766 | Canola | nucleus | 24.1 | 22.19 |
| CDY10168 | Canola | nucleus | 11.36 | 14.54 |
| CDX98605 | Canola | cytosol | 1.66 | 2.6 |
| CDY47710 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.29.30 | Gene3D:3.30.530.20 | MapMan:35.1 | GO:A0A078CSZ3 | EnsemblPlants:CDX78263 | ProteinID:CDX78263 |
| ProteinID:CDX78263.1 | InterPro:EDR2_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00129599001 |
| InterPro:IPR001849 | InterPro:IPR002913 | InterPro:IPR011993 | InterPro:IPR023393 | PFAM:PF00169 | PFAM:PF01852 |
| PFAM:PF07059 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PFscan:PS50003 | PFscan:PS50848 | PANTHER:PTHR12136 |
| PANTHER:PTHR12136:SF86 | SMART:SM00233 | SMART:SM00234 | SUPFAM:SSF50729 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EDD4D7 | SEG:seg | : | : | : |
Description
BnaA09g34580D
Coordinates
chrLK031814:+:2061960..2066641
Molecular Weight (calculated)
81994.8 Da
IEP (calculated)
8.189
GRAVY (calculated)
-0.394
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLLDDNLK SFRSVPSDQN EEPYRRASLD CCIRVTDNGR ESFNRKVLFI FTLYNTTNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKKFPF PDCEFVSHAE KGLVKFNVSR RSRRKNSVDW TNYSSLNVET IAPDVIAPSP WKIFGCQNGL RLFKEAKDWD SRGRHWDDHP
201: AIMAVGVIDG TSENIFNTLM SFGPLRSEWD FSFYKGSVVE HLDGHTDIIN VQLYSDWLPW GMNRRDLLLR RYWRREEDGT YVILCHSVYH KDCPPKKGYV
301: RACVKSGGYV VTPVNKAKQS LVKHMVAIDW RSWNLYTGAS SSRSITIRVV ERLAALREMF KAKQGHGFTE FVSGEFMDTK SCVSNINTGP LKIAAKRVDL
401: ELVKAEDMEK PSSARNSLMD LNDASDEFFD VPEPSEFDSF IDNSPISQGH SQLKIPSPAG IVKKLQDLAI NKKGYMDLQE VGMDEKTTFF YGATLQKDPN
501: LTLPCSWATA DPSTFLIRGD NYLQDQQKVK AKDTMMQMIG ADWISSDKRE DDLGGRLGGV VQEFAAKGGP EFFFIVNMQA PGSAMYSLAL YYMLKTPIED
601: HPLLHSFVNG DDAYRNSRFK LIPHISKGSW IVKQSVGKKA CLVGQALVVR YTRGKNYLEL DIDVGSSTVA RGVTNLVLGY LNNLVIEMAF LIQANTVEEL
701: PELLLGTCRL NYLDASKSVK ER
101: EEAAKWIRSL QDASQKKFPF PDCEFVSHAE KGLVKFNVSR RSRRKNSVDW TNYSSLNVET IAPDVIAPSP WKIFGCQNGL RLFKEAKDWD SRGRHWDDHP
201: AIMAVGVIDG TSENIFNTLM SFGPLRSEWD FSFYKGSVVE HLDGHTDIIN VQLYSDWLPW GMNRRDLLLR RYWRREEDGT YVILCHSVYH KDCPPKKGYV
301: RACVKSGGYV VTPVNKAKQS LVKHMVAIDW RSWNLYTGAS SSRSITIRVV ERLAALREMF KAKQGHGFTE FVSGEFMDTK SCVSNINTGP LKIAAKRVDL
401: ELVKAEDMEK PSSARNSLMD LNDASDEFFD VPEPSEFDSF IDNSPISQGH SQLKIPSPAG IVKKLQDLAI NKKGYMDLQE VGMDEKTTFF YGATLQKDPN
501: LTLPCSWATA DPSTFLIRGD NYLQDQQKVK AKDTMMQMIG ADWISSDKRE DDLGGRLGGV VQEFAAKGGP EFFFIVNMQA PGSAMYSLAL YYMLKTPIED
601: HPLLHSFVNG DDAYRNSRFK LIPHISKGSW IVKQSVGKKA CLVGQALVVR YTRGKNYLEL DIDVGSSTVA RGVTNLVLGY LNNLVIEMAF LIQANTVEEL
701: PELLLGTCRL NYLDASKSVK ER
001: MGVSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLHENNLT SFKSVPSDHN EEPERRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKGFPI PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS STSLNVETNV APDVIAPSPW KIFGCQNGLR LFKEAKDWDS
201: RGRHWDDHPA IMAVGVIDGT SEDIFNTLMS LGPLRSEWDF CFYKGNVVEH LDGHTDIIHL QLYSDWLPWG MNRRDLLLRR YWRREDDGTY VILCHSVYHK
301: NCPPKKGYVR ACVKSGGYVV TPANNGKQSL VKHMVAIDWR SWNLYMRPSS ARSITIRVVE RVAALREMFK AKQGHGFTEF VSGEFLDTKP CLSKINTMPL
401: KTEAKEVDLE TMHAEEMDKP TSARNSLMDL NDASDEFFDV PEPNESTEFD SFIDSSPYSQ GHQLKIPTPA GIVKKLQDLA INKKGYMDLQ EVGLEENNTF
501: FYGATLQKDP SLTLPCSWST ADPSTFLIRG NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ VPGSAMYSLA
601: LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK ACLVGQVLEV CYTRGKNYLE LDIDVGSSTV ARGVTNLVLG YLNNLVIEMA
701: FLIQANTVEE LPELLLGTCR LNYLDVSKSV KER
101: EEAAKWIRSL QDASQKGFPI PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS STSLNVETNV APDVIAPSPW KIFGCQNGLR LFKEAKDWDS
201: RGRHWDDHPA IMAVGVIDGT SEDIFNTLMS LGPLRSEWDF CFYKGNVVEH LDGHTDIIHL QLYSDWLPWG MNRRDLLLRR YWRREDDGTY VILCHSVYHK
301: NCPPKKGYVR ACVKSGGYVV TPANNGKQSL VKHMVAIDWR SWNLYMRPSS ARSITIRVVE RVAALREMFK AKQGHGFTEF VSGEFLDTKP CLSKINTMPL
401: KTEAKEVDLE TMHAEEMDKP TSARNSLMDL NDASDEFFDV PEPNESTEFD SFIDSSPYSQ GHQLKIPTPA GIVKKLQDLA INKKGYMDLQ EVGLEENNTF
501: FYGATLQKDP SLTLPCSWST ADPSTFLIRG NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ VPGSAMYSLA
601: LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK ACLVGQVLEV CYTRGKNYLE LDIDVGSSTV ARGVTNLVLG YLNNLVIEMA
701: FLIQANTVEE LPELLLGTCR LNYLDVSKSV KER
Arabidopsis Description
AT3G54800 protein [Source:UniProtKB/TrEMBL;Acc:B9DGX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.