CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01578	Canola	mitochondrion	5.42	3.49
CDY23114	Canola	mitochondrion	5.42	3.48
CDY13045	Canola	mitochondrion	5.42	3.48
CDX78916	Canola	mitochondrion	5.42	3.48
CDX99399	Canola	mitochondrion	5.42	3.48
CDX98603	Canola	mitochondrion	5.42	3.48
CDY69875	Canola	cytosol	2.6	2.6
CDY58454	Canola	cytosol	3.04	1.83
CDY02892	Canola	cytosol	2.82	1.79
CDY04553	Canola	cytosol	2.82	1.78
CDX71361	Canola	cytosol	2.82	1.77
CDX78263	Canola	cytosol	2.6	1.66
CDX73448	Canola	cytosol	2.6	1.66
CDY41766	Canola	nucleus	2.82	1.66
CDX67608	Canola	cytosol	2.39	1.52
CDY07523	Canola	cytosol	2.39	1.52
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	0.43	0.66
CDX78399	Canola	nucleus, plastid	0.43	0.66
CDY47711	Canola	cytosol	0.43	0.65
CDX80480	Canola	cytosol	0.22	0.49
CDX88148	Canola	cytosol	0.22	0.38
CDY05382	Canola	cytosol	0.22	0.37
CDY10168	Canola	nucleus	0.43	0.35
CDX88150	Canola	cytosol	0.22	0.35
CDX80479	Canola	cytoskeleton, cytosol, nucleus	0.22	0.34
CDY64695	Canola	cytosol, golgi, nucleus	0.22	0.31
CDY47710	Canola	nucleus	0.0	0.0
CDY41767	Canola	extracellular, golgi	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.7	Gene3D:3.30.200.20	GO:A0A078E964	EnsemblPlants:CDX98605	ProteinID:CDX98605
ProteinID:CDX98605.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00106638001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF336	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF276F	SEG:seg	:	:	:	:

Description

BnaA03g43900D

Coordinates

chrLK031906:-:70461..73295

Molecular Weight (calculated)

52299.0 Da

IEP (calculated)

10.144

GRAVY (calculated)

-0.483

Length

461 amino acids

Sequence
(BLAST)

001: MDRYKLIKEV GDGTFGTVWR AINKQTGEVV AIKNMKKKYY SWEECINLRE VKSLRRMNHP NIVKLKEVIR EHDILYFVFE YMECNLYQLM KDRKKLFAEA
101: DIRNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDIIKI ADFGLAREVN SSPPFTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMS ELLSLRPIFP
201: GASEADEIYK ICDVIGSPTE ETWLEGLNLA NTINYQFPQL SGVPLSSLMT SASKDAINLI TRLCSWDPCN RPTAAEALQH PFFQSCFYVQ PSLRPKPSVA
301: RTPPVGPRGS FEQQPVKRQP VSLAKAKTFN SHSSPKSNAA FGSGVHRKLD LAKQDATRNT KPVRSSVKDT IYRPPGRKSP CNAAGSSVNK NRVARGVSET
401: GDKLSNMSIR GTVSRRHSVS VMQQQQLKPP QMKAGCVGET RDMFIRPTQP TTNAYSRKVA G

Best Arabidopsis Sequence Match ( AT4G19110.2 )
(BLAST)

001: MDRYKLIKEV GDGTFGSVWR AINKQTGEVV AIKKMKKKYY SWDECINLRE VKSLRRMNHP NIVKLKEVIR ENDILYFVFE YMECNLYQLM KDRQKLFAEA
101: DIKNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDIIKI ADFGLAREVN SSPPFTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMA ELLSLRPIFP
201: GASEADEIYK ICSVIGTPTE ETWLEGLNLA NTINYQFPQL PGVPLSSLMP SASEDAINLI ERLCSWDPSS RPTAAEVLQH PFFQSCFYVP PSLRPKPSVA
301: RTPPPVGPRG SFEHQSVKRY PVSLANAKPF NSYVSPKSNA AFGSGVQRKL DMVNQDGTRN TKPVRSSVRD SKYRPPGKKS PHNAAAASLN KNRVTRSSVS
401: ETADKLANMT IGATGSRRHS VSVVGQHQQL KPPPMKAGWV GETRDMFLRP TQPTTNAYSR KVAG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.