Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88148 | Canola | cytosol | 83.96 | 93.18 |
| CDX80480 | Canola | cytosol | 58.7 | 83.9 |
| CDX88150 | Canola | cytosol | 79.18 | 82.27 |
| CDY05382 | Canola | cytosol | 63.14 | 68.77 |
| AT5G25010.1 | Thale cress | cytosol | 63.14 | 64.69 |
| AT5G24990.1 | Thale cress | cytosol | 63.82 | 63.61 |
| AT5G25020.1 | Thale cress | cytosol | 58.36 | 63.57 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.41 | 58.42 |
| CDX78399 | Canola | nucleus, plastid | 60.07 | 58.09 |
| KRH52302 | Soybean | cytosol | 52.9 | 53.63 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 55.63 | 53.44 |
| KRH15692 | Soybean | cytosol | 53.92 | 53.02 |
| KRH61636 | Soybean | cytosol | 53.24 | 52.53 |
| PGSC0003DMT400067616 | Potato | cytosol | 46.76 | 47.24 |
| GSMUA_Achr5P04860_001 | Banana | plastid | 43.34 | 45.36 |
| KRH05337 | Soybean | cytosol | 41.64 | 45.02 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 47.1 | 43.81 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 47.1 | 43.81 |
| GSMUA_Achr7P15920_001 | Banana | cytosol | 48.46 | 43.29 |
| GSMUA_Achr5P21900_001 | Banana | cytosol | 48.81 | 43.2 |
| Solyc08g006590.1.1 | Tomato | cytosol | 40.61 | 42.81 |
| Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 43.34 | 39.08 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 42.66 | 39.06 |
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 42.66 | 38.94 |
| TraesCS7B01G325500.1 | Wheat | cytosol | 42.66 | 38.82 |
| OQU76985 | Sorghum | cytosol, extracellular, nucleus | 42.32 | 38.15 |
| Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 39.93 | 35.78 |
| HORVU7Hr1G098100.1 | Barley | plastid | 43.0 | 35.59 |
| CDY47711 | Canola | cytosol | 32.42 | 30.84 |
| CDY41767 | Canola | extracellular, golgi | 8.19 | 25.26 |
| CDY64695 | Canola | cytosol, golgi, nucleus | 22.18 | 20.44 |
| CDY10168 | Canola | nucleus | 31.74 | 16.49 |
| CDX78916 | Canola | mitochondrion | 32.42 | 13.23 |
| CDX99399 | Canola | mitochondrion | 32.42 | 13.23 |
| CDY01578 | Canola | mitochondrion | 32.08 | 13.13 |
| CDX98603 | Canola | mitochondrion | 32.08 | 13.09 |
| CDY13045 | Canola | mitochondrion | 31.74 | 12.95 |
| CDY23114 | Canola | mitochondrion | 31.4 | 12.81 |
| CDY58454 | Canola | cytosol | 30.72 | 11.75 |
| CDY41766 | Canola | nucleus | 30.72 | 11.48 |
| CDY04553 | Canola | cytosol | 27.65 | 11.08 |
| CDX71361 | Canola | cytosol | 27.3 | 10.91 |
| CDX67608 | Canola | cytosol | 26.28 | 10.66 |
| CDY07523 | Canola | cytosol | 25.6 | 10.39 |
| CDX78263 | Canola | cytosol | 24.91 | 10.11 |
| CDX73448 | Canola | cytosol | 24.23 | 9.83 |
| CDY02892 | Canola | cytosol | 24.23 | 9.79 |
| CDY69875 | Canola | cytosol | 2.05 | 1.3 |
| CDX98605 | Canola | cytosol | 0.34 | 0.22 |
| CDY47710 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX80479 | EnsemblPlantsGene:GSBRNA2T00133572001 | InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF88 | PFAM:PF07059 |
| ProteinID:CDX80479 | ProteinID:CDX80479.1 | SEG:seg | UniParc:UPI0004EF443E | MapMan:35.1 | : |
Description
BnaC07g29650D
Coordinates
chrLK031821:-:821115..822228
Molecular Weight (calculated)
32641.2 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.472
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQTQSPSDD NNTKPTRTGE KSTEPEWITE TTNGGSTRHV DLHTGINGWA SPPGDVFSVR SADYFTNKQK CPGGDYLLSA AGVDWLKSST KLDNILARPD
101: NRVSHALRKA QSLGRSQNGF IFAVNFHIPG KEHHHSVHYF ATEEPIPSDS LLKRFIDGDD SFRNERFKIV SQVVKGPWIV KAAAGQFGAF LAAKTVKCTY
201: HKGPNYFEID VDTGSWPILA ALVRLLFEYS RYLTVDIGYV VEAQEEDELP ERLIGGIRLC HMEVSSAFVV DPQPLKLYRM MGSAEASHDD NTH
101: NRVSHALRKA QSLGRSQNGF IFAVNFHIPG KEHHHSVHYF ATEEPIPSDS LLKRFIDGDD SFRNERFKIV SQVVKGPWIV KAAAGQFGAF LAAKTVKCTY
201: HKGPNYFEID VDTGSWPILA ALVRLLFEYS RYLTVDIGYV VEAQEEDELP ERLIGGIRLC HMEVSSAFVV DPQPLKLYRM MGSAEASHDD NTH
001: MNQTKTTTDD NKNSKPAETE STITVPEWIT ETINGGSFCH VDLETGTNGW ASPPGNVFSL RSHNYFTATK QKSPGGDYLL SLAAVDWLKS TTKKLDHILS
101: RPDNRVIHAF KTSQSRSFIF AVNFQVPGKE HYNLVFYFAT QKPIPSDSLL HKFINTDEDS FRNERFKIVS NVVKGPWVVK AAAGKFGAFV AGKAMKCTYY
201: RGDNYFEVDV DISSSAIMTA LIRFMLGYVT YLMVDIGFVV EAQTAEELPE RLIGGARICH MELSSSFLVD DDEKKSLQPR RRMMGAAEDN DDEI
101: RPDNRVIHAF KTSQSRSFIF AVNFQVPGKE HYNLVFYFAT QKPIPSDSLL HKFINTDEDS FRNERFKIVS NVVKGPWVVK AAAGKFGAFV AGKAMKCTYY
201: RGDNYFEVDV DISSSAIMTA LIRFMLGYVT YLMVDIGFVV EAQTAEELPE RLIGGARICH MELSSSFLVD DDEKKSLQPR RRMMGAAEDN DDEI
Arabidopsis Description
Enhanced disease resistance-like protein (DUF1336) [Source:UniProtKB/TrEMBL;Acc:Q94AK1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.