Factsheet for AT5G24990.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G25020.1	Thale cress	cytosol	82.31	89.96
AT5G25010.1	Thale cress	cytosol	80.27	82.52
Bra036529.1-P	Field mustard	cytosol	62.93	64.91
CDX80479	Canola	cytoskeleton, cytosol, nucleus	63.61	63.82
CDY05382	Canola	cytosol	58.16	63.57
Bra009807.1-P	Field mustard	cytosol	61.56	61.77
CDX88148	Canola	cytosol	55.1	61.36
Bra009809.1-P	Field mustard	cytosol	57.48	59.93
CDX88150	Canola	cytosol	57.14	59.57
CDX80480	Canola	cytosol	41.5	59.51
AT5G10750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	58.5	56.95
KRH52302	Soybean	cytosol	52.04	52.94
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	53.4	51.48
KRH15692	Soybean	cytosol	51.36	50.67
KRH61636	Soybean	cytosol	51.02	50.51
PGSC0003DMT400067616	Potato	cytosol	47.96	48.62
Solyc08g006590.1.1	Tomato	cytosol	42.52	44.96
Solyc08g068880.1.1	Tomato	mitochondrion	47.62	44.44
PGSC0003DMT400038272	Potato	mitochondrion	47.62	44.44
KRH05337	Soybean	cytosol	40.82	44.28
GSMUA_Achr5P21900_001	Banana	cytosol	48.98	43.5
GSMUA_Achr7P15920_001	Banana	cytosol	47.28	42.38
GSMUA_Achr5P04860_001	Banana	plastid	40.14	42.14
TraesCS7A01G424300.1	Wheat	cytosol	43.88	40.31
TraesCS7B01G325500.1	Wheat	cytosol	43.88	40.06
TraesCS7D01G417100.2	Wheat	cytosol, mitochondrion, nucleus	43.54	39.88
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	43.54	39.38
OQU76985	Sorghum	cytosol, extracellular, nucleus	43.2	39.08
Zm00001d036506_P001	Maize	extracellular, nucleus, plastid	40.48	36.39
HORVU7Hr1G098100.1	Barley	plastid	43.2	35.88
AT1G06050.1	Thale cress	cytosol	32.65	30.67
AT5G45560.1	Thale cress	mitochondrion	34.69	14.19
AT4G19040.2	Thale cress	mitochondrion	34.69	14.11
AT2G28320.1	Thale cress	cytosol	28.57	11.4
AT5G35180.4	Thale cress	cytosol	31.29	11.34
AT3G54800.1	Thale cress	cytosol	26.87	10.78

Protein Annotations

MapMan:35.1	EntrezGene:832569	ProteinID:AED93386.1	ArrayExpress:AT5G24990	EnsemblPlantsGene:AT5G24990	RefSeq:AT5G24990
TAIR:AT5G24990	RefSeq:AT5G24990-TAIR-G	EnsemblPlants:AT5G24990.1	TAIR:AT5G24990.1	EMBL:AY045987	EMBL:AY079327
InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008150	GO:GO:0008289	RefSeq:NP_197881.1
PFAM:PF07059	PO:PO:0000293	PANTHER:PTHR12136	PANTHER:PTHR12136:SF88	UniProt:Q94AK1	UniParc:UPI00000A7866
SEG:seg	:	:	:	:	:

Description

Enhanced disease resistance-like protein (DUF1336) [Source:UniProtKB/TrEMBL;Acc:Q94AK1]

Coordinates

chr5:+:8610313..8611948

Molecular Weight (calculated)

32942.0 Da

IEP (calculated)

6.404

GRAVY (calculated)

-0.335

Length

294 amino acids

Sequence
(BLAST)

001: MNQTKTTTDD NKNSKPAETE STITVPEWIT ETINGGSFCH VDLETGTNGW ASPPGNVFSL RSHNYFTATK QKSPGGDYLL SLAAVDWLKS TTKKLDHILS
101: RPDNRVIHAF KTSQSRSFIF AVNFQVPGKE HYNLVFYFAT QKPIPSDSLL HKFINTDEDS FRNERFKIVS NVVKGPWVVK AAAGKFGAFV AGKAMKCTYY
201: RGDNYFEVDV DISSSAIMTA LIRFMLGYVT YLMVDIGFVV EAQTAEELPE RLIGGARICH MELSSSFLVD DDEKKSLQPR RRMMGAAEDN DDEI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.