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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017600.1-P Field mustard mitochondrion, nucleus 93.05 93.18
CDY13045 Canola mitochondrion 92.91 93.04
CDY23114 Canola mitochondrion 92.91 93.04
AT4G19040.2 Thale cress mitochondrion 89.29 88.8
KRG90499 Soybean extracellular 8.21 80.82
VIT_02s0033g00080.t01 Wine grape mitochondrion 79.42 80.42
KRH39650 Soybean mitochondrion 78.3 77.55
KRH76356 Soybean mitochondrion 78.03 77.17
Solyc12g096050.1.1 Tomato mitochondrion 77.19 76.66
GSMUA_Achr5P17990_001 Banana mitochondrion 75.38 74.45
VIT_02s0033g00120.t01 Wine grape cytosol 75.38 73.84
Solyc08g005410.2.1 Tomato cytosol 72.04 73.06
PGSC0003DMT400047520 Potato cytosol 72.18 72.69
EER94411 Sorghum cytosol, nucleus, plastid 73.44 72.23
TraesCS7D01G523200.2 Wheat plastid 72.18 71.59
VIT_02s0033g00160.t01 Wine grape cytosol, extracellular 13.91 71.43
TraesCS7B01G458700.1 Wheat cytosol, plastid 71.91 71.31
GSMUA_Achr11P... Banana mitochondrion 73.71 69.92
HORVU7Hr1G117780.12 Barley plastid 71.77 69.45
TraesCS7A01G538600.2 Wheat cytosol, plastid 72.32 68.97
Zm00001d014442_P007 Maize cytosol, nucleus, plasma membrane, plastid 64.95 64.5
Os10t0455900-01 Rice plasma membrane 28.23 64.44
VIT_15s0107g00410.t01 Wine grape cytosol 48.4 62.7
AT5G10750.1 Thale cress cytosol, mitochondrion, nucleus, plastid 15.86 37.75
AT5G25010.1 Thale cress cytosol 14.05 35.31
AT5G24990.1 Thale cress cytosol 14.19 34.69
AT5G25020.1 Thale cress cytosol 12.52 33.46
AT2G28320.1 Thale cress cytosol 32.68 31.89
AT1G06050.1 Thale cress cytosol 13.49 30.99
AT3G54800.1 Thale cress cytosol 30.04 29.47
AT5G35180.4 Thale cress cytosol 28.51 25.28
Protein Annotations
Gene3D:2.30.29.30Gene3D:3.30.530.20MapMan:35.1EntrezGene:834592ProteinID:AED95268.1ProteinID:ANM71187.1
ArrayExpress:AT5G45560EnsemblPlantsGene:AT5G45560RefSeq:AT5G45560TAIR:AT5G45560RefSeq:AT5G45560-TAIR-GEnsemblPlants:AT5G45560.1
TAIR:AT5G45560.1EMBL:AY064989Unigene:At.28292ProteinID:BAB11194.1InterPro:EDR2_CGO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768
GO:GO:0005783GO:GO:0005789GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0008289GO:GO:0010008GO:GO:0016020GO:GO:0016021InterPro:IPR001849InterPro:IPR002913
InterPro:IPR011993InterPro:IPR023393RefSeq:NP_001332734.1RefSeq:NP_199369.2PFAM:PF01852PFAM:PF07059
InterPro:PH-like_dom_sfInterPro:PH_domainPO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PFscan:PS50003PFscan:PS50848PANTHER:PTHR12136PANTHER:PTHR12136:SF47
UniProt:Q8VZF6SMART:SM00233SMART:SM00234SUPFAM:SSF50729SUPFAM:SSF55961InterPro:START-like_dom_sf
InterPro:START_lipid-bd_domUniParc:UPI00000A5924SEG:seg:::
Description
EDR2LProtein ENHANCED DISEASE RESISTANCE 2-like [Source:UniProtKB/Swiss-Prot;Acc:Q8VZF6]
Coordinates
chr5:+:18465283..18470944
Molecular Weight (calculated)
81729.2 Da
IEP (calculated)
6.646
GRAVY (calculated)
-0.460
Length
719 amino acids
Sequence
(BLAST)
001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDNQLPIK TMVIDGNCRV EDRGLKTHHG HMVYVLSIYN KKEKHHRITM AAFNIQEALM
101: WKEKIECVID QHQDSLVPSG QQYVSFEYKP GMDAGRTASS SDHESPFSAL EDENDSQRDL LRRTTIGNGP PESILDWTKE FDAELSNQSS SNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELVMSMD GTRYEWDCSF HNGRLVEEVD GHTAILYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGFVRAH LESGGFNIAP LKPRNGRPRT QVQHLIQIDL KGWGSGYLPA FQQHCLLQML NSVSGLREWF SQTDDRGQPI
401: RIPVMVNMAS SSLALGKGGK HHHKSSLSID QTNGASRNSV LMDEDSDDDD EFQIPDSEPE PETSKQDQET DAKKTEEPAL NIDLSCFSGN LRHDDNENAR
501: NCWRISDGNN FKVRGKSFCD DKRKIPAGKH LMDLVAVDWF KDTKRMDHVV RRKGCAAQVA AEKGLFSTVV NVQVPGSTHY SMVFYFVTKE LVPGSLFQRF
601: VDGDDEFRNS RLKLIPLVPK GSWIVRQSVG STPCLLGKAV DCNYIRGPTY LEIDVDIGSS TVANGVLGLV IGVITSLVVE MAFLVQANTP EELPERLIGA
701: VRVSHVELSS AIVPNLDSD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.