Factsheet for VIT_15s0107g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90499	Soybean	extracellular	10.81	82.19
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	18.2	72.14
VIT_02s0033g00080.t01	Wine grape	mitochondrion	69.19	54.08
KRH39650	Soybean	mitochondrion	66.85	51.1
KRH76356	Soybean	mitochondrion	66.49	50.76
Solyc12g096050.1.1	Tomato	mitochondrion	65.95	50.55
CDX78916	Canola	mitochondrion	64.32	49.72
Bra013371.1-P	Field mustard	mitochondrion	64.32	49.72
CDX99399	Canola	mitochondrion	64.14	49.58
Solyc08g005410.2.1	Tomato	cytosol	63.24	49.51
GSMUA_Achr5P17990_001	Banana	mitochondrion	64.68	49.31
CDY01578	Canola	mitochondrion	63.6	49.3
PGSC0003DMT400047520	Potato	cytosol	63.24	49.16
AT4G19040.2	Thale cress	mitochondrion	63.96	49.1
EER94411	Sorghum	cytosol, nucleus, plastid	64.5	48.97
CDX98603	Canola	mitochondrion	63.06	48.75
VIT_02s0033g00120.t01	Wine grape	cytosol	64.14	48.5
AT5G45560.1	Thale cress	mitochondrion	62.7	48.4
Bra017600.1-P	Field mustard	mitochondrion, nucleus	62.34	48.19
CDY13045	Canola	mitochondrion	62.16	48.05
CDY23114	Canola	mitochondrion	61.98	47.91
TraesCS7D01G523200.2	Wheat	plastid	62.34	47.72
TraesCS7B01G458700.1	Wheat	cytosol, plastid	61.8	47.31
HORVU7Hr1G117780.12	Barley	plastid	62.52	46.7
GSMUA_Achr11P...	Banana	mitochondrion	63.24	46.31
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	60.18	46.13
TraesCS7A01G538600.2	Wheat	cytosol, plastid	62.52	46.02
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	20.0	36.39
Bra012558.1-P	Field mustard	cytosol	63.24	26.49
VIT_05s0102g00770.t01	Wine grape	cytosol	17.12	26.39
VIT_06s0004g02720.t01	Wine grape	cytosol	29.55	22.34
VIT_15s0107g00440.t01	Wine grape	cytosol	8.47	13.78

Protein Annotations

KEGG:00230+2.7.7.7	KEGG:00240+2.7.7.7	Gene3D:3.30.530.20	MapMan:35.1	ProteinID:CCB60892	ProteinID:CCB60892.1
InterPro:EDR2_C	UniProt:F6I1S5	EMBL:FN596514	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005575	GO:GO:0006139	GO:GO:0006259	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0008289	GO:GO:0009987	GO:GO:0015074	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002913
InterPro:IPR023393	PFAM:PF01852	PFAM:PF07059	PFAM:PF07727	PFscan:PS50848	PANTHER:PTHR12136
PANTHER:PTHR12136:SF47	InterPro:RVT_2	SMART:SM00234	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI000210A809	ArrayExpress:VIT_15s0107g00410	EnsemblPlantsGene:VIT_15s0107g00410	EnsemblPlants:VIT_15s0107g00410.t01	SEG:seg	:

Description

No Description!

Coordinates

chr15:-:8665455..8695586

Molecular Weight (calculated)

62399.5 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.258

Length

555 amino acids

Sequence
(BLAST)

001: MVLKNLLELG FDHFTKVVKG FGYSWCHSDH TLFVKHTVKG RTAIIIVYVG DIILTKDHEE EIGKLKSIFA HEFEIKDLGN LKYFFGMEIT RSNMGIVVSQ
101: CKYVLDLLTE IEMLEFIWPR DLCYVRYWRR NDDGSYVVLF RSREHEHCGP QPGFVRAHIE SGGFNISPLK PRHGRPRSKV QHLMQIDLKG WGVGYLSSFK
201: QHCLLQMLNG VAGLREWFSQ SDERHTAPRI PVMINMTSAS VSSQKNQENQ EPAGKGFPSL DELHSASRNS MMLDEFSDED EEFQVAEVEQ EAYNEVEQTA
301: LEEDPTDQID LSCFSGNLRR NDNDDGRDCW TISDGNNFRV RSKHFFSDKS KIPAGKHTME LVAVDWLKDI KRIDHVARRP GCAVQVASEK GLFSLAINLQ
401: VPGSTHYSMV FYLVTKQLVP GSLLQCFVDG DDEFRNSRLK LIPSVPKGSW IVRQSVGSTP CLLGKAVDCT YIRGPKYLEI DVDIGSSTVA NGVLGLVCGV
501: ITTLVVDMAF LVQANTAEEL PERLLSAVRV SHVELSSAID PNLESKSSPS PSSSN

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.