Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0455900-01 | Rice | plasma membrane | 51.32 | 55.56 |
| VIT_02s0033g00080.t01 | Wine grape | mitochondrion | 62.46 | 30.0 |
| VIT_02s0033g00120.t01 | Wine grape | cytosol | 61.58 | 28.61 |
| GSMUA_Achr4P12370_001 | Banana | mitochondrion | 54.25 | 25.66 |
| GSMUA_Achr4P05670_001 | Banana | mitochondrion | 49.85 | 23.38 |
| VIT_06s0004g02720.t01 | Wine grape | cytosol | 23.75 | 11.04 |
| VIT_15s0107g00410.t01 | Wine grape | cytosol | 13.78 | 8.47 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 6.45 | 7.21 |
| VIT_02s0033g00160.t01 | Wine grape | cytosol, extracellular | 2.93 | 7.14 |
| VIT_05s0102g00770.t01 | Wine grape | cytosol | 4.69 | 4.44 |
Protein Annotations
| ArrayExpress:VIT_15s0107g00440 | EMBL:FN596514 | EnsemblPlants:VIT_15s0107g00440.t01 | EnsemblPlantsGene:VIT_15s0107g00440 | Gene3D:2.30.29.30 | Gene3D:3.30.530.20 |
| InterPro:IPR001849 | InterPro:IPR011993 | InterPro:IPR023393 | InterPro:PH-like_dom_sf | InterPro:PH_domain | InterPro:START-like_dom_sf |
| PANTHER:PTHR12136 | PANTHER:PTHR12136:SF47 | PFscan:PS50003 | ProteinID:CBI38217 | ProteinID:CBI38217.3 | SMART:SM00233 |
| SUPFAM:SSF50729 | SUPFAM:SSF55961 | UniParc:UPI0001BE4F9D | UniProt:D7U648 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr15:-:8713309..8742746
Molecular Weight (calculated)
39499.4 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.383
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: METKSSKVVY EGWMVRCGRR KIGRAFIHMR YFVLEPQLLA YYKKKPQTNQ VPIKALVIDG NCRVEDRGMK AQHGNMVYVL CVYNKKDKSR QIMMAAFNIQ
101: EALMWKEKIE LVIDQHQGSS IPDGNGYSSY DNNLAVDSMK IGFHSDQESQ YSALEDEDDH GPRLLRRTTF GNGPPESVLD WTGRFDEDLL NMNNSNQVVS
201: RKHWRLLQCQ NGKQIIAGLR IFEELLEADY LPRSCSRAMG AIGVVEASCE EIFELVMNMD STRFEWDCSF QYGSLVEEVD GHTAVLYHRL QLYWYPTQGS
301: MLKCICWILH THLLCVMYAK YQVDWELRAA PVLECTDIQS R
101: EALMWKEKIE LVIDQHQGSS IPDGNGYSSY DNNLAVDSMK IGFHSDQESQ YSALEDEDDH GPRLLRRTTF GNGPPESVLD WTGRFDEDLL NMNNSNQVVS
201: RKHWRLLQCQ NGKQIIAGLR IFEELLEADY LPRSCSRAMG AIGVVEASCE EIFELVMNMD STRFEWDCSF QYGSLVEEVD GHTAVLYHRL QLYWYPTQGS
301: MLKCICWILH THLLCVMYAK YQVDWELRAA PVLECTDIQS R
001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE
Arabidopsis Description
EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.