Factsheet for VIT_02s0033g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	17.85	93.57
VIT_02s0033g00080.t01	Wine grape	mitochondrion	85.83	88.73
KRH76356	Soybean	mitochondrion	78.75	79.5
KRH39650	Soybean	mitochondrion	78.07	78.93
Solyc12g096050.1.1	Tomato	mitochondrion	75.61	76.66
Bra013371.1-P	Field mustard	mitochondrion	74.66	76.32
CDX78916	Canola	mitochondrion	74.66	76.32
CDY01578	Canola	mitochondrion	74.39	76.26
CDX99399	Canola	mitochondrion	74.39	76.04
AT4G19040.2	Thale cress	mitochondrion	74.66	75.8
CDX98603	Canola	mitochondrion	73.98	75.63
AT5G45560.1	Thale cress	mitochondrion	73.84	75.38
Bra017600.1-P	Field mustard	mitochondrion, nucleus	72.62	74.23
CDY23114	Canola	mitochondrion	72.62	74.23
CDY13045	Canola	mitochondrion	72.48	74.09
GSMUA_Achr5P17990_001	Banana	mitochondrion	72.07	72.66
Solyc08g005410.2.1	Tomato	cytosol	70.03	72.5
PGSC0003DMT400047520	Potato	cytosol	69.89	71.85
TraesCS7D01G523200.2	Wheat	plastid	68.12	68.97
EER94411	Sorghum	cytosol, nucleus, plastid	68.66	68.95
GSMUA_Achr11P...	Banana	mitochondrion	70.57	68.34
TraesCS7B01G458700.1	Wheat	cytosol, plastid	67.44	68.28
HORVU7Hr1G117780.12	Barley	plastid	67.71	66.89
TraesCS7A01G538600.2	Wheat	cytosol, plastid	68.12	66.31
KRG90499	Soybean	extracellular	6.54	65.75
VIT_15s0107g00410.t01	Wine grape	cytosol	48.5	64.14
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	61.17	62.02
VIT_15s0107g00440.t01	Wine grape	cytosol	28.61	61.58
Bra012558.1-P	Field mustard	cytosol	71.53	39.62
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	13.62	32.79
VIT_06s0004g02720.t01	Wine grape	cytosol	28.88	28.88
VIT_05s0102g00770.t01	Wine grape	cytosol	11.85	24.17

Protein Annotations

EntrezGene:100241468	wikigene:100241468	Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	ProteinID:CBI37375
ProteinID:CBI37375.3	UniProt:D7U3Q6	InterPro:EDR2_C	EMBL:FN596505	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0008270	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993
InterPro:IPR023393	EntrezGene:LOC100241468	wikigene:LOC100241468	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf
InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233
SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0001982CFC
ArrayExpress:VIT_02s0033g00120	EnsemblPlantsGene:VIT_02s0033g00120	EnsemblPlants:VIT_02s0033g00120.t01	unigene:Vvi.16469	RefSeq:XP_002262861	RefSeq:XP_002262861.1
RefSeq:XP_010664767.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:13593068..13673561

Molecular Weight (calculated)

84152.1 Da

IEP (calculated)

6.757

GRAVY (calculated)

-0.470

Length

734 amino acids

Sequence
(BLAST)

001: MVASNVVHEG WMVRYGLRKI GTSYIHMRYF VLESRLLAYY KRKPVQDAVP IKTLLIGGNC RVEDRGLKTH RGHMVYVLSI YNKKEKNHQI MMAAFNIQEA
101: LIWKEKIEAV IDQHQDSQVA NGNKYISFEY KSGMDNGRAA SSSDHESQFS AEDDEEDTHR ALVRRKTIGN DFPDSVFDWT REMDSELLNQ DINNQAFSSD
201: QKKEKNNQAF PKKHWRLLQC QNGLRIFEEL LEVDYLPRSC SRAMKAVGVV KATCEEIFEL VMSMDGTRFE WDCSFQYGSL VEEVDGHTAI LYHRLQLGWF
301: PMFVWPRDLC YVRYWCRNDD GSYVVLFRSR EHENCGPQPG CVRAHLESGG FIISPLKPRN GRPRTQVQHL MQIDLKGWGT GYISSFQQHC VLQMLNSVAG
401: LREWFSQTDK RNALPRIPVM VNMASTSFTS EKNQKPQESS DQLNATSRNS MMMDEYSDED EEFQAPETEQ EAYSMSLPNE VKGTAMEEEP QDKIDVSCFS
501: GNLRRDDRDK GRDCWTISDG NNFRVRSKHF CYDKTKIPAG KHLMDLVAVD WFKDSKRIDH VARRQGCAAQ VASEKGLFSI VINLQVPGST HYSMIFYFVT
601: KELLTGSLLQ RFVDGYDEFR NSRLKLIPSV PKAPWMVRRI VGSTPHFLGK VVDCNYIRGP KYLEIDVDFG SSTVVDGALA FVNGAIPNLV VDMAFLVQGN
701: TEDELPERLI GAVRVSRVDF SSAIVPKLDP YTYA

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.