Factsheet for Solyc08g005410.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047520	Potato	cytosol	97.46	96.78
KRG90499	Soybean	extracellular	8.32	80.82
Solyc12g096050.1.1	Tomato	mitochondrion	81.66	79.97
VIT_02s0033g00080.t01	Wine grape	mitochondrion	74.47	74.37
KRH76356	Soybean	mitochondrion	76.16	74.28
KRH39650	Soybean	mitochondrion	75.6	73.83
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	14.53	73.57
CDX78916	Canola	mitochondrion	73.91	72.98
Bra013371.1-P	Field mustard	mitochondrion	73.91	72.98
CDX99399	Canola	mitochondrion	73.77	72.84
CDY01578	Canola	mitochondrion	73.2	72.49
CDY23114	Canola	mitochondrion	73.2	72.28
Bra017600.1-P	Field mustard	mitochondrion, nucleus	73.2	72.28
CDX98603	Canola	mitochondrion	73.06	72.14
CDY13045	Canola	mitochondrion	73.06	72.14
AT4G19040.2	Thale cress	mitochondrion	73.48	72.06
AT5G45560.1	Thale cress	mitochondrion	73.06	72.04
GSMUA_Achr5P17990_001	Banana	mitochondrion	72.21	70.33
VIT_02s0033g00120.t01	Wine grape	cytosol	72.5	70.03
TraesCS7D01G523200.2	Wheat	plastid	69.82	68.28
EER94411	Sorghum	cytosol, nucleus, plastid	70.1	67.99
TraesCS7B01G458700.1	Wheat	cytosol, plastid	69.25	67.72
HORVU7Hr1G117780.12	Barley	plastid	69.53	66.35
TraesCS7A01G538600.2	Wheat	cytosol, plastid	69.96	65.78
GSMUA_Achr11P...	Banana	mitochondrion	70.1	65.57
VIT_15s0107g00410.t01	Wine grape	cytosol	49.51	63.24
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	62.2	60.91
Os10t0455900-01	Rice	plasma membrane	24.26	54.6
Solyc08g006590.1.1	Tomato	cytosol	14.81	37.77
Bra012558.1-P	Field mustard	cytosol	70.24	37.58
Solyc08g068880.1.1	Tomato	mitochondrion	16.22	36.51
Solyc04g025280.2.1	Tomato	cytosol	26.52	32.19
Solyc06g075130.2.1	Tomato	nucleus	32.02	31.97
Solyc11g069530.1.1	Tomato	cytosol	32.58	31.64
Solyc07g005000.2.1	Tomato	cytosol	30.47	28.69
Solyc06g053360.2.1	Tomato	cytosol	11.42	26.56

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	ncoils:Coil	InterPro:EDR2_C	GO:GO:0003674
GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393
UniProt:K4CI32	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003
PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47	SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	EnsemblPlantsGene:Solyc08g005410.2	EnsemblPlants:Solyc08g005410.2.1	UniParc:UPI000276B85F

Description

No Description!

Coordinates

chr8:-:304828..312257

Molecular Weight (calculated)

80080.6 Da

IEP (calculated)

6.602

GRAVY (calculated)

-0.391

Length

709 amino acids

Sequence
(BLAST)

001: MSKVVHEGWM VRYGRRKIGK SFLHMRYFVL ETKLLAYFKT KPQGNVSPIK TLEIDGNFRV EDRGLKTHHG QMVYVLSVYN MKEKHDQITM AAFNIQEALI
101: WKEKIESVID QHQESVGGSR AKLNDFKSGT ESTGRTTSDQ ESPFSAAEDE DESQQNMLRG TTIANAIAPP ESVVDWTKES ESDLANPKYR RLLYCQNGLR
201: FFEELLNVDL LPKGCSRAMK AVGVVGATCE EIFELVMSMD ATRFEWDCSF QYGSLVEEVD GHTAILYHRL RLDWFPTFIW PRDLCYVRYW RRNDDGSYVV
301: LFRSREHKNC NPLPGYVRAH IESGGFNISP LKPRNGRPRT QVQQLMQIDL KGWGVGFITS FQQHCLFQML NSVAGLREYF SQTDERAAAP RIPVMVNMNP
401: PSISSKKSQK LSHHRTPSLD QIRAANRNAV SMLDEYSDED EDFQGTDQEV SSPGLENDTI KTALEEEPME HIDMSTFSGN LRHDDSDNGR DCWTISDGKN
501: FRVRGKNFCT DKTKVPAGQS LMDLVAVDWF KDTKRMDHVA RRPGCAAQVA SEKGLFTLVI NLQVPGSTHY SMIFYFVMKK LIPGSLLQRF VDGDDEFRNS
601: RMKLIPSVPK GSWIVRQSVG SSPCLLGKAV DCNYIRGPKY LEIDVDVGSS TVANGVMGLV IGVITTLVVD MAFLVQGNTP DELPEPLIGA ARVCHIELSS
701: AVVPKLEPE

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.